RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PI16Q6UXB8 463 aa12.96□□□□□ -0.33
PTCH1-225ENST00000551845 DZIP1Q86YF9 867 aaKnown RBP12.96□□□□□ -0.33
PTCH1-225ENST00000551845 APOBEC3FQ8IUX4 373 aaKnown RBP12.96□□□□□ -0.33
PTCH1-225ENST00000551845 ZDHHC15Q96MV8 337 aa12.96□□□□□ -0.33
PTCH1-225ENST00000551845 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
PTCH1-225ENST00000551845 RAI14Q9P0K7 980 aa12.96□□□□□ -0.33
PTCH1-225ENST00000551845 PCDHAC2Q9Y5I4 1007 aa12.96□□□□□ -0.33
PTCH1-225ENST00000551845 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-225ENST00000551845 ZAP70P43403 619 aa12.95□□□□□ -0.34
PTCH1-225ENST00000551845 GSTO1P78417 241 aa12.95□□□□□ -0.34
PTCH1-225ENST00000551845 APOBEC3HQ6NTF7 200 aaKnown RBP12.95□□□□□ -0.34
PTCH1-225ENST00000551845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTCH1-225ENST00000551845 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-225ENST00000551845 VEZTQ9HBM0 779 aa12.95□□□□□ -0.34
PTCH1-225ENST00000551845 ZNF70Q9UC06 446 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-225ENST00000551845 TNRC18O15417 2968 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-225ENST00000551845 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 ADM5C9JUS6 153 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-225ENST00000551845 ATP5JP18859 108 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 TNNI2P48788 182 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 TNFAIP1Q13829 316 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-225ENST00000551845 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 GPATCH3Q96I76 525 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 DEFB129Q9H1M3 183 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 ECHDC1Q9NTX5 307 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
PTCH1-225ENST00000551845 IGHDP01880 384 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 NF2P35240 595 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 MECOMQ03112 1051 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 RGMBQ6NW40 437 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 DLK2Q6UY11 383 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 C2orf69Q8N8R5 385 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 NSUN4Q96CB9 384 aaKnown RBP12.93□□□□□ -0.34
PTCH1-225ENST00000551845 BOLA2Q9H3K6 86 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
PTCH1-225ENST00000551845 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
PTCH1-225ENST00000551845 TRPA1O75762 1119 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-225ENST00000551845 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 PRAMEF18Q5VWM3 479 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-225ENST00000551845 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 PPP2R3BQ9Y5P8 575 aa12.92□□□□□ -0.34
PTCH1-225ENST00000551845 GPR75-ASB3A0A0A6YYF3 556 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 TCP10L2B9ZVM9 353 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 IDH1O75874 414 aaKnown RBP12.91□□□□□ -0.34
PTCH1-225ENST00000551845 BAG3O95817 575 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 RASA3Q14644 834 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 B4GALNT3Q6L9W6 998 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
PTCH1-225ENST00000551845 NOL10Q9BSC4 688 aaKnown RBP12.91□□□□□ -0.34
PTCH1-225ENST00000551845 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 GBA2Q9HCG7 927 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-225ENST00000551845 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
PTCH1-225ENST00000551845 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 AKAP11Q9UKA4 1901 aa12.91□□□□□ -0.34
PTCH1-225ENST00000551845 COL1A1P02452 1464 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-225ENST00000551845 GOLIM4O00461 696 aa12.9□□□□□ -0.34
PTCH1-225ENST00000551845 ERC2O15083 957 aa12.9□□□□□ -0.34
PTCH1-225ENST00000551845 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-225ENST00000551845 BTDP43251 543 aa12.9□□□□□ -0.34
PTCH1-225ENST00000551845 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-225ENST00000551845 FKBP1BP68106 108 aa12.9□□□□□ -0.34
PTCH1-225ENST00000551845 TMED8Q6PL24 325 aaPredicted RBP12.9□□□□□ -0.34
PTCH1-225ENST00000551845 CTU1Q7Z7A3 348 aaKnown RBP12.9□□□□□ -0.34
PTCH1-225ENST00000551845 HAUS7Q99871 368 aa12.9□□□□□ -0.34
PTCH1-225ENST00000551845 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
PTCH1-225ENST00000551845 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 GAKO14976 1311 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 AOX1Q06278 1338 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 TTC41PQ6P2S7 1318 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 FAM155AB1AL88 458 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-225ENST00000551845 CACNB3P54284 484 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-225ENST00000551845 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 PAG1Q9NWQ8 432 aa12.89□□□□□ -0.35
PTCH1-225ENST00000551845 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-225ENST00000551845 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
PTCH1-225ENST00000551845 NEFLP07196 543 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 PLCG2P16885 1265 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 CYP7A1P22680 504 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 PPP4CP60510 307 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 SLC9C2Q5TAH2 1124 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-225ENST00000551845 ARMC9Q7Z3E5 817 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 MAGEB6Q8N7X4 407 aa12.88□□□□□ -0.35
PTCH1-225ENST00000551845 ZNF384Q8TF68 577 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms