RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	ANGEL1	Q9UNK9	670 aa	Known RBP	11.11	□□□□□ -0.63
ATXN2-223	ENST00000551551	CSAD	Q9Y600	493 aa		11.11	□□□□□ -0.63
ATXN2-223	ENST00000551551	HAX1	O00165	279 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	SURF6	O75683	361 aa	Known RBP	11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	BAG3	O95817	575 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	TIMM10	P62072	90 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	FMR1	Q06787	632 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	DZIP1	Q86YF9	867 aa	Known RBP	11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	FAM151A	Q8WW52	585 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	XAGE2	Q96GT9	111 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	CSRNP1	Q96S65	589 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	CFHR5	Q9BXR6	569 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	TDRD3	Q9H7E2	651 aa	Known RBP	11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	COL4A1	P02462	1669 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	PAPPA2	Q9BXP8	1791 aa		11.1	□□□□□ -0.63
ATXN2-223	ENST00000551551	UBE2Q2L	H0YL09	131 aa		11.09	□□□□□ -0.63
ATXN2-223	ENST00000551551	RAB11FIP3	O75154	756 aa		11.09	□□□□□ -0.63
ATXN2-223	ENST00000551551	HSPA8	P11142	646 aa	Known RBP	11.09	□□□□□ -0.63
ATXN2-223	ENST00000551551	MAP3K9	P80192	1104 aa		11.09	□□□□□ -0.63
ATXN2-223	ENST00000551551	TFCP2	Q12800	502 aa		11.09	□□□□□ -0.63
ATXN2-223	ENST00000551551	ZCCHC17	Q9NP64	241 aa	Known RBP	11.09	□□□□□ -0.63
ATXN2-223	ENST00000551551	SPEF2	Q9C093	1822 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	CLRN2	A0PK11	232 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	AOC2	O75106	756 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	ENTPD3	O75355	529 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	GTF2A2	P52657	109 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	AAMP	Q13685	434 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	SPRYD7	Q5W111	196 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	RASAL3	Q86YV0	1011 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	SPATA5	Q8NB90	893 aa		11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	POLR2A	P24928	1970 aa	Known RBP	11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	ASTN2	O75129	1339 aa	Predicted RBP	11.08	□□□□□ -0.64
ATXN2-223	ENST00000551551	PCNT	O95613	3336 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	USP2	O75604	605 aa	Predicted RBP	11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	ARID4A	P29374	1257 aa	Predicted RBP	11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	TTF1	Q15361	905 aa	Predicted RBP	11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	CLASRP	Q8N2M8	674 aa	Known RBP	11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	IDI2	Q9BXS1	227 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	TBC1D2	Q9BYX2	928 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	USP40	Q9NVE5	1235 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	RNF186	Q9NXI6	227 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	LRP2BP	Q9P2M1	347 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	ABCF2	Q9UG63	623 aa		11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	PA2G4	Q9UQ80	394 aa	Known RBP	11.07	□□□□□ -0.64
ATXN2-223	ENST00000551551	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	PNMA6E	A0A0J9YXQ4	647 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	TCP10L2	B9ZVM9	353 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	TRPA1	O75762	1119 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	PHKA1	P46020	1223 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	FXR2	P51116	673 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	TTC39A	Q5SRH9	613 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	ERO1B	Q86YB8	467 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	KIF1BP	Q96EK5	621 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	ZNF341	Q9BYN7	854 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	DHX36	Q9H2U1	1008 aa	Known RBP	11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	JAG2	Q9Y219	1238 aa		11.06	□□□□□ -0.64
ATXN2-223	ENST00000551551	GPR75-ASB3	A0A0A6YYF3	556 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	TESPA1	A2RU30	521 aa	Predicted RBP	11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	PPAT	Q06203	517 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	RASGRF1	Q13972	1273 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	TNNI3K	Q59H18	835 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	PRAMEF18	Q5VWM3	479 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	GINM1	Q9NU53	330 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	ZBTB40	Q9NUA8	1239 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	FPGT-TNNI3K	V9GXZ4	949 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	GAK	O14976	1311 aa		11.05	□□□□□ -0.64
ATXN2-223	ENST00000551551	TBC1D12	O60347	775 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	ECM2	O94769	699 aa	Predicted RBP	11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	GNRH1	P01148	92 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	CETP	P11597	493 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	MAP3K12	Q12852	859 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	CDC42EP5	Q6NZY7	148 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	CEP85	Q6P2H3	762 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	TEPSIN	Q96N21	525 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	RAI14	Q9P0K7	980 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	DAGLA	Q9Y4D2	1042 aa		11.04	□□□□□ -0.64
ATXN2-223	ENST00000551551	THSD7B	Q9C0I4	1608 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	IFIT2	P09913	472 aa	Known RBP	11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	PRDX5	P30044	214 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	PPP4C	P60510	307 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	MAP3K10	Q02779	954 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	SNAPC2	Q13487	334 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	PRKG1	Q13976	671 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	NAA16	Q6N069	864 aa	Predicted RBP	11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	IFNL1	Q8IU54	200 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	WNK4	Q96J92	1243 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	TMEM39B	Q9GZU3	492 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	HMG20B	Q9P0W2	317 aa		11.03	□□□□□ -0.64
ATXN2-223	ENST00000551551	CXCL11	O14625	94 aa		11.02	□□□□□ -0.65
ATXN2-223	ENST00000551551	CTNND1	O60716	968 aa	Known RBP	11.02	□□□□□ -0.65
ATXN2-223	ENST00000551551	FKTN	O75072	461 aa		11.02	□□□□□ -0.65
ATXN2-223	ENST00000551551	MECOM	Q03112	1051 aa		11.02	□□□□□ -0.65
ATXN2-223	ENST00000551551	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.02	□□□□□ -0.65

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