RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MAP2K7O14733 419 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 HTATSF1O43719 755 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 SASH3O75995 380 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 IGFBP4P22692 258 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 INHBEP58166 350 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 CCZ1BP86790 482 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 CCZ1P86791 482 aaPredicted RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 PTSQ03393 145 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 GPS2Q13227 327 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 TEAD4Q15561 434 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 NBPF9Q3BBW0 867 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 INTS3Q68E01 1043 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 TMEM214Q6NUQ4 689 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 CCAR2Q8N163 923 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 STAG2Q8N3U4 1231 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 JMYQ8N9B5 988 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 ZNF428Q96B54 188 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 C16orf45Q96MC5 204 aaPredicted RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 HINFPQ9BQA5 517 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 TMX1Q9H3N1 280 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 DCTPP1Q9H773 170 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 ORC3Q9UBD5 711 aaPredicted RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 RGS12O14924 1447 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 YTHDC2Q9H6S0 1430 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 UNC13BO14795 1591 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 ARHGEF5Q12774 1597 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 SPAG9O60271 1321 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 NUP153P49790 1475 aaKnown RBP6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 USP32Q8NFA0 1604 aa6.21□□□□□ -1.42
LSM3P2-201ENST00000551246 TTC37Q6PGP7 1564 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 TRAPPC8Q9Y2L5 1435 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 EIF3CLB5ME19 914 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 PRMT3O60678 531 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 TADA3O75528 432 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 ATP4AP20648 1035 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 PHKA2P46019 1235 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 PSMA6P60900 246 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 MAP9Q49MG5 647 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 NOM1Q5C9Z4 860 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 DNAJC21Q5F1R6 531 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 GNASQ5JWF2 1037 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 PHLDB3Q6NSJ2 640 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 FILIP1Q7Z7B0 1213 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 NBPF11Q86T75 865 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 LRRC8AQ8IWT6 810 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 CCDC144CPQ8IYA2 1237 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 SCG3Q8WXD2 468 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 PPM1EQ8WY54 764 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 GTF3C6Q969F1 213 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 BORCS6Q96GS4 357 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 DRC1Q96MC2 740 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 C2orf49Q9BVC5 232 aaPredicted RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 UTP14AQ9BVJ6 771 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 NIFKQ9BYG3 293 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 NOB1Q9ULX3 412 aaKnown RBP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 SH3BP1Q9Y3L3 701 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 MADDQ8WXG6 1647 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 FANCAO15360 1455 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 TTC21BQ7Z4L5 1316 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
LSM3P2-201ENST00000551246 SBNO2Q9Y2G9 1366 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 CD109Q6YHK3 1445 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 A0A087WUV0 522 aaPredicted RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 USP27XA6NNY8 438 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 IPO8O15397 1037 aaKnown RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 CAVIN2O95810 425 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 TPM1P09493 284 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ZNF853P0CG23 659 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 CCDC192P0DO97 292 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 OAS2P29728 719 aaKnown RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 NOS2P35228 1153 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 PTPN14Q15678 1187 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ZKSCAN8Q15776 578 aaPredicted RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 TPD52L1Q16890 204 aaPredicted RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ERCC6LQ2NKX8 1250 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 CCDC158Q5M9N0 1113 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ANKRD45Q5TZF3 282 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ZNF787Q6DD87 383 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 TMED8Q6PL24 325 aaPredicted RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 PRAM1Q96QH2 718 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 BCL2L13Q9BXK5 485 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 FUT8Q9BYC5 575 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 SRCIN1Q9C0H9 1055 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 OSBPL5Q9H0X9 879 aaPredicted RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 DEF6Q9H4E7 631 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 CABP1Q9NZU7 370 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 CXXC1Q9P0U4 656 aaPredicted RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 NRBP1Q9UHY1 535 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ERVK-7P63135 1459 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 ABCC4O15439 1325 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 URB2Q14146 1524 aaKnown RBP6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 EFCAB6Q5THR3 1501 aa6.19□□□□□ -1.42
LSM3P2-201ENST00000551246 NEURL4Q96JN8 1562 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms