RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 CFAP45Q9UL16 551 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 NID2Q14112 1375 aa17■□□□□ 0.31
SCN8A-207ENST00000551216 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 DNM1Q05193 864 aaKnown RBP16.99■□□□□ 0.31
SCN8A-207ENST00000551216 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
SCN8A-207ENST00000551216 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
SCN8A-207ENST00000551216 CERS3Q8IU89 383 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 WDR66Q8TBY9 1149 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 CRAMP1Q96RY5 1269 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 TMEM63CQ9P1W3 806 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 MYH15Q9Y2K3 1946 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 LRSAM1Q6UWE0 723 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 CHAMP1Q96JM3 812 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
SCN8A-207ENST00000551216 NRXN2Q9P2S2 1712 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 GOLGA8BA8MQT2 603 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 RESTQ13127 1097 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 GAS2L3Q86XJ1 694 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 IGDCC4Q8TDY8 1250 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
SCN8A-207ENST00000551216 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
SCN8A-207ENST00000551216 CPLX1O14810 134 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 FIBPO43427 364 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 ATP2B4P23634 1241 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 CCT2P78371 535 aaKnown RBP16.97■□□□□ 0.31
SCN8A-207ENST00000551216 PPP2R5BQ15173 497 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 ANKIB1Q9P2G1 1089 aa16.97■□□□□ 0.31
SCN8A-207ENST00000551216 B4E1Z4 1266 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 CYB5R4Q7L1T6 521 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 TDRD7Q8NHU6 1098 aaKnown RBP16.96■□□□□ 0.31
SCN8A-207ENST00000551216 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 IQSEC3Q9UPP2 1182 aaPredicted RBP16.96■□□□□ 0.31
SCN8A-207ENST00000551216 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 NEDD4P46934 1319 aa16.96■□□□□ 0.31
SCN8A-207ENST00000551216 POLRMTO00411 1230 aaKnown RBP16.96■□□□□ 0.3
SCN8A-207ENST00000551216 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.3
SCN8A-207ENST00000551216 FGRP09769 529 aa16.96■□□□□ 0.3
SCN8A-207ENST00000551216 PPARAQ07869 468 aa16.96■□□□□ 0.3
SCN8A-207ENST00000551216 APOA5Q6Q788 366 aa16.96■□□□□ 0.3
SCN8A-207ENST00000551216 ILDR1Q86SU0 546 aaPredicted RBP16.96■□□□□ 0.3
SCN8A-207ENST00000551216 PROM2Q8N271 834 aa16.96■□□□□ 0.3
SCN8A-207ENST00000551216 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.3
SCN8A-207ENST00000551216 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.3
SCN8A-207ENST00000551216 ERICH2A1L162 156 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 GSTO1P78417 241 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 MECOMQ03112 1051 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 FOXD4L6Q3SYB3 417 aaPredicted RBP16.95■□□□□ 0.3
SCN8A-207ENST00000551216 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 FOXD4L3Q6VB84 417 aaPredicted RBP16.95■□□□□ 0.3
SCN8A-207ENST00000551216 SYNE3Q6ZMZ3 975 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
SCN8A-207ENST00000551216 ESR2Q92731 530 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 ZNF396Q96N95 335 aaPredicted RBP16.95■□□□□ 0.3
SCN8A-207ENST00000551216 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
SCN8A-207ENST00000551216 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 NCOA5Q9HCD5 579 aaKnown RBP16.95■□□□□ 0.3
SCN8A-207ENST00000551216 ZSWIM5Q9P217 1185 aa16.95■□□□□ 0.3
SCN8A-207ENST00000551216 ZBTB43O43298 467 aa16.94■□□□□ 0.3
SCN8A-207ENST00000551216 PRKAB2O43741 272 aa16.94■□□□□ 0.3
SCN8A-207ENST00000551216 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCN8A-207ENST00000551216 FERMT3Q86UX7 667 aa16.94■□□□□ 0.3
SCN8A-207ENST00000551216 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
SCN8A-207ENST00000551216 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
SCN8A-207ENST00000551216 LAMB1P07942 1786 aa16.94■□□□□ 0.3
SCN8A-207ENST00000551216 STK36Q9NRP7 1315 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 CCDC196A0A1B0GTZ2 297 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 WTIPA6NIX2 430 aaPredicted RBP16.93■□□□□ 0.3
SCN8A-207ENST00000551216 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
SCN8A-207ENST00000551216 KDM4AO75164 1064 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
SCN8A-207ENST00000551216 KLRK1P26718 216 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 TTC6Q86TZ1 520 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 FBXO18Q8NFZ0 1043 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
SCN8A-207ENST00000551216 TFCP2L1Q9NZI6 479 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 RBM27Q9P2N5 1060 aaKnown RBP16.93■□□□□ 0.3
SCN8A-207ENST00000551216 ORC3Q9UBD5 711 aaPredicted RBP16.93■□□□□ 0.3
SCN8A-207ENST00000551216 SLC12A7Q9Y666 1083 aa16.93■□□□□ 0.3
SCN8A-207ENST00000551216 SYCE3A1L190 88 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 LDHCP07864 332 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
SCN8A-207ENST00000551216 NASPP49321 788 aaPredicted RBP16.92■□□□□ 0.3
SCN8A-207ENST00000551216 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 DDR1Q08345 913 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 BRAPQ7Z569 592 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 ZNF384Q8TF68 577 aa16.92■□□□□ 0.3
SCN8A-207ENST00000551216 LEO1Q8WVC0 666 aaPredicted RBP16.92■□□□□ 0.3
SCN8A-207ENST00000551216 C8orf76Q96K31 380 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms