RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 GLIS3Q8NEA6 775 aa6.43□□□□□ -1.38
TSPAN8-205ENST00000550818 HHIPQ96QV1 700 aa6.43□□□□□ -1.38
TSPAN8-205ENST00000550818 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
TSPAN8-205ENST00000550818 GGNBP2Q9H3C7 697 aa6.43□□□□□ -1.38
TSPAN8-205ENST00000550818 SLC5A6Q9Y289 635 aa6.43□□□□□ -1.38
TSPAN8-205ENST00000550818 FNDC3AQ9Y2H6 1198 aaKnown RBP6.43□□□□□ -1.38
TSPAN8-205ENST00000550818 SOX1O00570 391 aaPredicted RBP6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 TAGLNQ01995 201 aaKnown RBP6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 ZNF765Q7L2R6 523 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 FAM168AQ92567 244 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 NIF3L1Q9GZT8 377 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 DZANK1Q9NVP4 752 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 KANSL3Q9P2N6 904 aa6.42□□□□□ -1.38
TSPAN8-205ENST00000550818 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 MAPK8P45983 427 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 ARL4DP49703 201 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 MESP2Q0VG99 397 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 TTC16Q8NEE8 873 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 TMEM40Q8WWA1 233 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 USP26Q9BXU7 913 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 TMEM63CQ9P1W3 806 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 KIAA1522Q9P206 1035 aaPredicted RBP6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 CNTN3Q9P232 1028 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 SALL4Q9UJQ4 1053 aa6.41□□□□□ -1.38
TSPAN8-205ENST00000550818 A6NHS1 94 aa6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 PRRG2O14669 202 aa6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 TRPA1O75762 1119 aa6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 SOX4Q06945 474 aaPredicted RBP6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 XKR5Q6UX68 686 aa6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 VN1R5Q7Z5H4 357 aa6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 MRRFQ96E11 262 aaKnown RBP6.4□□□□□ -1.38
TSPAN8-205ENST00000550818 NCANO14594 1321 aa6.4□□□□□ -1.39
TSPAN8-205ENST00000550818 LDHBP07195 334 aaKnown RBP6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 NEFLP07196 543 aa6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 FGD1P98174 961 aa6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 ENOX2Q16206 610 aaKnown RBP6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 PDE12Q6L8Q7 609 aaKnown RBP6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 ELP3Q9H9T3 547 aa6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 MBNL3Q9NUK0 354 aaKnown RBP6.39□□□□□ -1.39
TSPAN8-205ENST00000550818 PRPF40AO75400 957 aaKnown RBP6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 NFICP08651 508 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 ATP2B2Q01814 1243 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 BNIP3Q12983 259 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 ORC1Q13415 861 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 CSRNP1Q96S65 589 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 SLC38A3Q99624 504 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 DNAJC25Q9H1X3 360 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 ADAMTS6Q9UKP5 1117 aa6.38□□□□□ -1.39
TSPAN8-205ENST00000550818 PNMA6FA0A0J9YX94 578 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 FUT4P22083 530 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 VAMP1P23763 118 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 IKBKEQ14164 716 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 ZNF438Q7Z4V0 828 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 C1QL4Q86Z23 238 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 STK11IPQ8N1F8 1099 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 YIPF2Q9BWQ6 316 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 BCL11AQ9H165 835 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 RC3H2Q9HBD1 1191 aaKnown RBP6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 WWC3Q9ULE0 1092 aa6.37□□□□□ -1.39
TSPAN8-205ENST00000550818 EIF1AYO14602 144 aaKnown RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 CPNE3O75131 537 aaKnown RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 TNFRSF21O75509 655 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 CFPP27918 469 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 ALG1LQ6GMV1 187 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 LCNL1Q6ZST4 164 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 TMEM102Q8N9M5 508 aaPredicted RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 BHLHE22Q8NFJ8 381 aaPredicted RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 SNX29Q8TEQ0 813 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 FBF1Q8TES7 1133 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 BSNDQ8WZ55 320 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 FAM84AQ96KN4 292 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 SETDB2Q96T68 719 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 DUSP9Q99956 384 aaKnown RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 SEMA6CQ9H3T2 930 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 SOX17Q9H6I2 414 aaPredicted RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 FOXD3Q9UJU5 478 aaPredicted RBP6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 ACTL7BQ9Y614 415 aa6.36□□□□□ -1.39
TSPAN8-205ENST00000550818 ADH5P11766 374 aa6.35□□□□□ -1.39
TSPAN8-205ENST00000550818 C1orf127Q8N9H9 656 aa6.35□□□□□ -1.39
TSPAN8-205ENST00000550818 NXPE3Q969Y0 559 aa6.35□□□□□ -1.39
TSPAN8-205ENST00000550818 C1GALT1Q9NS00 363 aa6.35□□□□□ -1.39
TSPAN8-205ENST00000550818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.35□□□□□ -1.39
TSPAN8-205ENST00000550818 PARP2Q9UGN5 583 aa6.35□□□□□ -1.39
TSPAN8-205ENST00000550818 B8ZZF3 427 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 CD8BP10966 210 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 CES1P23141 567 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 BUD31P41223 144 aaPredicted RBP6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 XPCQ01831 940 aaPredicted RBP6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 MRPL58Q14197 206 aaKnown RBP6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 MAP7Q14244 749 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 SEZ6L2Q6UXD5 910 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
TSPAN8-205ENST00000550818 NRSN2Q9GZP1 204 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms