RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 MCCP23508 829 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 RPS12P25398 132 aaKnown RBP9.74□□□□□ -0.85
GPN3-207ENST00000550228 CFAP100Q494V2 611 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 HHIPL2Q6UWX4 724 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 TEX11Q8IYF3 940 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 OGFOD1Q8N543 542 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 SDR42E1Q8WUS8 393 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 DSCC1Q9BVC3 393 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 C22orf23Q9BZE7 217 aa9.74□□□□□ -0.85
GPN3-207ENST00000550228 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
GPN3-207ENST00000550228 FOCADQ5VW36 1801 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 FOXP2O15409 715 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 DDNO94850 711 aaPredicted RBP9.73□□□□□ -0.85
GPN3-207ENST00000550228 GNAT2P19087 354 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 USP5P45974 858 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 TDO2P48775 406 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 HDLBPQ00341 1268 aaKnown RBP9.73□□□□□ -0.85
GPN3-207ENST00000550228 DLGAP5Q15398 846 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 RBM26Q5T8P6 1007 aaKnown RBP9.73□□□□□ -0.85
GPN3-207ENST00000550228 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
GPN3-207ENST00000550228 EPB41L4AQ9HCS5 686 aaPredicted RBP9.73□□□□□ -0.85
GPN3-207ENST00000550228 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 USP40Q9NVE5 1235 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 U3KPZ7 1027 aaPredicted RBP9.73□□□□□ -0.85
GPN3-207ENST00000550228 LAMB1P07942 1786 aa9.73□□□□□ -0.85
GPN3-207ENST00000550228 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 MYH1P12882 1939 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 GSG1L2A8MUP6 293 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
GPN3-207ENST00000550228 PLCG2P16885 1265 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 RHBDL3P58872 404 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 PPP4CP60510 307 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 PICALMQ13492 652 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 SLC4A8Q2Y0W8 1093 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 APOBEC3HQ6NTF7 200 aaKnown RBP9.72□□□□□ -0.85
GPN3-207ENST00000550228 CDC42EP5Q6NZY7 148 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 MAPKAPK5Q8IW41 473 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 IFNL3Q8IZI9 196 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 GPC2Q8N158 579 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 TGFBRAP1Q8WUH2 860 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 MAP4K1Q92918 833 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 ZDHHC15Q96MV8 337 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 TBC1D32Q96NH3 1257 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 NACAP1Q9BZK3 213 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 NAPBQ9H115 298 aa9.72□□□□□ -0.85
GPN3-207ENST00000550228 CNOT7Q9UIV1 285 aaKnown RBP9.72□□□□□ -0.85
GPN3-207ENST00000550228 CLRN2A0PK11 232 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 SLC27A2O14975 620 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 FGAP02671 866 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.86
GPN3-207ENST00000550228 HSPA4P34932 840 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 CACNB3P54284 484 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 HAND2P61296 217 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 TBC1D10BQ4KMP7 808 aaPredicted RBP9.71□□□□□ -0.86
GPN3-207ENST00000550228 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 CERS3Q8IU89 383 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 DPF2Q92785 391 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 PRMT6Q96LA8 375 aaPredicted RBP9.71□□□□□ -0.86
GPN3-207ENST00000550228 MRIQ9BWK5 157 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 TDRD3Q9H7E2 651 aaKnown RBP9.71□□□□□ -0.86
GPN3-207ENST00000550228 MYOZ2Q9NPC6 264 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 DCP1AQ9NPI6 582 aaPredicted RBP9.71□□□□□ -0.86
GPN3-207ENST00000550228 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 SAP30BPQ9UHR5 308 aaKnown RBP9.71□□□□□ -0.86
GPN3-207ENST00000550228 PALD1Q9ULE6 856 aa9.71□□□□□ -0.86
GPN3-207ENST00000550228 DDX60LQ5H9U9 1706 aaKnown RBP9.7□□□□□ -0.86
GPN3-207ENST00000550228 CYP2D7A0A087X1C5 515 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 MINDY4BA8MYZ0 360 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 H7C1D1 291 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 EPB41L2O43491 1005 aaKnown RBP9.7□□□□□ -0.86
GPN3-207ENST00000550228 CYP2D6P10635 497 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 EPS15P42566 896 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
GPN3-207ENST00000550228 IMMTQ16891 758 aaKnown RBP9.7□□□□□ -0.86
GPN3-207ENST00000550228 KIF4BQ2VIQ3 1234 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 STK11IPQ8N1F8 1099 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 VEZTQ9HBM0 779 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 GPRC5DQ9NZD1 345 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 FLT1P17948 1338 aa9.7□□□□□ -0.86
GPN3-207ENST00000550228 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
GPN3-207ENST00000550228 RPAP1Q9BWH6 1393 aaPredicted RBP9.7□□□□□ -0.86
GPN3-207ENST00000550228 TCP10L2B9ZVM9 353 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 USP17L21D6R901 530 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 MYO1BO43795 1136 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 WDHD1O75717 1129 aaPredicted RBP9.69□□□□□ -0.86
GPN3-207ENST00000550228 ZMYM6O95789 1325 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 EGFRP00533 1210 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 CYP21A2P08686 494 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 RBM25P49756 843 aaKnown RBP9.69□□□□□ -0.86
GPN3-207ENST00000550228 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 TCP10Q12799 353 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms