RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	CTNNA3	Q9UI47	895 aa		13.9	□□□□□ -0.18
CNOT2-223	ENST00000550160	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.9	□□□□□ -0.18
CNOT2-223	ENST00000550160	GAK	O14976	1311 aa		13.9	□□□□□ -0.19
CNOT2-223	ENST00000550160	APP	P05067	770 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	SCNN1D	P51172	638 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	ADGRA1	Q86SQ6	560 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZNF384	Q8TF68	577 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	STRBP	Q96SI9	672 aa	Known RBP	13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	MXD3	Q9BW11	206 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	ARMT1	Q9H993	441 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	SERPINA10	Q9UK55	444 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	SCN9A	Q15858	1988 aa		13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.89	□□□□□ -0.19
CNOT2-223	ENST00000550160	PSME4	Q14997	1843 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	GPR75-ASB3	A0A0A6YYF3	556 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	HSPD1	P10809	573 aa	Known RBP	13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZKSCAN1	P17029	563 aa	Predicted RBP	13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	BTD	P43251	543 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	CRK	P46108	304 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	RBM5	P52756	815 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	LCORL	Q8N3X6	602 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	MAP4K1	Q92918	833 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	TBC1D32	Q96NH3	1257 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	DAGLA	Q9Y4D2	1042 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	SLC4A4	Q9Y6R1	1079 aa		13.88	□□□□□ -0.19
CNOT2-223	ENST00000550160	PATL2	C9JE40	543 aa	Known RBP	13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	USP17L8	P0C7I0	530 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	RBM25	P49756	843 aa	Known RBP	13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	VASP	P50552	380 aa	Predicted RBP	13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	PRELP	P51888	382 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	PPP4C	P60510	307 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	PTH1R	Q03431	593 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	C9orf131	Q5VYM1	1079 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZDHHC15	Q96MV8	337 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	GML	Q99445	158 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	RIOK1	Q9BRS2	568 aa	Known RBP	13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	NAPB	Q9H115	298 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	RBM8A	Q9Y5S9	174 aa	Known RBP	13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	GJA3	Q9Y6H8	435 aa		13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.87	□□□□□ -0.19
CNOT2-223	ENST00000550160	HSPA4	P34932	840 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	TDO2	P48775	406 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	DYNLL1	P63167	89 aa	Known RBP	13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	GIMAP6	Q6P9H5	292 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	AMOTL1	Q8IY63	956 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	GPC2	Q8N158	579 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	DPF2	Q92785	391 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	ATP8A2	Q9NTI2	1148 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZMYM6	O95789	1325 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZNF541	Q9H0D2	1346 aa		13.86	□□□□□ -0.19
CNOT2-223	ENST00000550160	USP5	P45974	858 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	ANAPC15	P60006	121 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	DLGAP5	Q15398	846 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	ALX1	Q15699	326 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	IMMT	Q16891	758 aa	Known RBP	13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	VPS53	Q5VIR6	699 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	DPY19L2	Q6NUT2	758 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	TEX11	Q8IYF3	940 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	TSHZ2	Q9NRE2	1034 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	TMOD2	Q9NZR1	351 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	MYH2	Q9UKX2	1941 aa		13.85	□□□□□ -0.19
CNOT2-223	ENST00000550160	DICER1	Q9UPY3	1922 aa	Known RBP	13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	GSG1L2	A8MUP6	293 aa		13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	MYO1B	O43795	1136 aa		13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	GMPS	P49915	693 aa	Predicted RBP	13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	KRT32	Q14532	448 aa		13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	CFAP100	Q494V2	611 aa		13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	IFNL3	Q8IZI9	196 aa		13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.84	□□□□□ -0.19
CNOT2-223	ENST00000550160	ZNF646	O15015	1829 aa	Predicted RBP	13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	SBF1	O95248	1867 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160		H7C1D1	291 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	ZNF213	O14771	459 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	PRKAB2	O43741	272 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	FGA	P02671	866 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	NECTIN1	Q15223	517 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	CREB3L3	Q68CJ9	461 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	MICALL2	Q8IY33	904 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	SDR42E1	Q8WUS8	393 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	USP40	Q9NVE5	1235 aa		13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.83	□□□□□ -0.2
CNOT2-223	ENST00000550160	SLC27A2	O14975	620 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	LMOD1	P29536	600 aa	Predicted RBP	13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	RHBDL3	P58872	404 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	ZNF280A	P59817	542 aa	Predicted RBP	13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	CDC42EP5	Q6NZY7	148 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	MTMR14	Q8NCE2	650 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	IL27	Q8NEV9	243 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	TGFBRAP1	Q8WUH2	860 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	MYOZ2	Q9NPC6	264 aa		13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	CNOT7	Q9UIV1	285 aa	Known RBP	13.82	□□□□□ -0.2
CNOT2-223	ENST00000550160	TIAM2	Q8IVF5	1701 aa		13.81	□□□□□ -0.2
CNOT2-223	ENST00000550160	FOXP2	O15409	715 aa		13.81	□□□□□ -0.2
CNOT2-223	ENST00000550160	SLC3A2	P08195	630 aa	Known RBP	13.81	□□□□□ -0.2
CNOT2-223	ENST00000550160	PSMA5	P28066	241 aa		13.81	□□□□□ -0.2
CNOT2-223	ENST00000550160	ANP32A	P39687	249 aa	Known RBP	13.81	□□□□□ -0.2
CNOT2-223	ENST00000550160	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms