RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 IQSEC3Q9UPP2 1182 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 MAST3O60307 1309 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 IRF6O14896 467 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 BCAMP50895 628 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 CACNB3P54284 484 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 LACTBP83111 547 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 PPATQ06203 517 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 PPIL2Q13356 520 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 KIF22Q14807 665 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 C17orf99Q6UX52 265 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 WRNIP1Q96S55 665 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 TMOD2Q9NZR1 351 aa12.39□□□□□ -0.43
TRAFD1-207ENST00000550051 FGFR2P21802 821 aa12.38□□□□□ -0.43
TRAFD1-207ENST00000550051 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAFD1-207ENST00000550051 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
TRAFD1-207ENST00000550051 FAM151AQ8WW52 585 aa12.38□□□□□ -0.43
TRAFD1-207ENST00000550051 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
TRAFD1-207ENST00000550051 IFIT1P09914 478 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 ARHGAP39Q9C0H5 1083 aa12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 COLQQ9Y215 455 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-207ENST00000550051 ANP32CO43423 234 aa12.36□□□□□ -0.43
TRAFD1-207ENST00000550051 PUM3Q15397 648 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-207ENST00000550051 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
TRAFD1-207ENST00000550051 SH3TC2Q8TF17 1288 aa12.36□□□□□ -0.43
TRAFD1-207ENST00000550051 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
TRAFD1-207ENST00000550051 PTPRCP08575 1304 aa12.36□□□□□ -0.43
TRAFD1-207ENST00000550051 HOXD10P28358 340 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 INPP5BP32019 993 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 MIGA2Q7L4E1 593 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 LPIN2Q92539 896 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 SRRDQ9UH36 339 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
TRAFD1-207ENST00000550051 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 H0YGN5 161 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 EYA2O00167 538 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 PDHXO00330 501 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 CXCL11O14625 94 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 CTGFP29279 349 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 PSMC4P43686 418 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 MOGSQ13724 837 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 TRIM47Q96LD4 638 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 AK9Q5TCS8 1911 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 ADGRA2Q96PE1 1338 aa12.34□□□□□ -0.43
TRAFD1-207ENST00000550051 SLC5A1P13866 664 aa12.33□□□□□ -0.44
TRAFD1-207ENST00000550051 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-207ENST00000550051 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
TRAFD1-207ENST00000550051 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
TRAFD1-207ENST00000550051 CPA4Q9UI42 421 aa12.33□□□□□ -0.44
TRAFD1-207ENST00000550051 MYH13Q9UKX3 1938 aa12.33□□□□□ -0.44
TRAFD1-207ENST00000550051 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 GJB1P08034 283 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 OSBPP22059 807 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 GRK4P32298 578 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 GJA8P48165 433 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 MTFR1Q15390 333 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 ATG9AQ7Z3C6 839 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 UBE2Q1Q7Z7E8 422 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 DAGLAQ9Y4D2 1042 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
TRAFD1-207ENST00000550051 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 SEMA3EO15041 775 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 CIAO1O76071 339 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 BCRP11274 1271 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 CAPN2P17655 700 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 TCP10Q12799 353 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 NFIAQ12857 509 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 SSH1Q8WYL5 1049 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 MGAMO43451 1857 aa12.31□□□□□ -0.44
TRAFD1-207ENST00000550051 LDHBP07195 334 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 PRDX5P30044 214 aa12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 DIXDC1Q155Q3 683 aa12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 FASTKD5Q7L8L6 764 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 IDI2Q9BXS1 227 aa12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 CEP126Q9P2H0 1117 aa12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 SLC45A1Q9Y2W3 748 aa12.3□□□□□ -0.44
TRAFD1-207ENST00000550051 E9PSI1 815 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms