RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ALG1Q9BT22 464 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 SEC31BQ9NQW1 1179 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 ANO10Q9NW15 660 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 MRVI1Q9Y6F6 885 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 NID2Q14112 1375 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 SPTLC2O15270 562 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 ZPR1O75312 459 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 NR1I2O75469 434 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 SLC3A2P08195 630 aaKnown RBP10.39□□□□□ -0.75
TMEM116-209ENST00000550020 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
TMEM116-209ENST00000550020 XBP1P17861 261 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 CYP7A1P22680 504 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 ZNF165P49910 485 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 SSRP1Q08945 709 aaKnown RBP10.39□□□□□ -0.75
TMEM116-209ENST00000550020 TPTE2Q6XPS3 522 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 CEP57L1Q8IYX8 460 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 FSIP1Q8NA03 581 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 ESR2Q92731 530 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 USP28Q96RU2 1077 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 SETDB2Q96T68 719 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 UBAC1Q9BSL1 405 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 ARMT1Q9H993 441 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 RAI14Q9P0K7 980 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 NARFQ9UHQ1 456 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 ANAPC4Q9UJX5 808 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 MYH7P12883 1935 aa10.39□□□□□ -0.75
TMEM116-209ENST00000550020 SPATA31A6Q5VVP1 1343 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 A0A0G2JLW4 131 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 GSG1L2A8MUP6 293 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 B4E1Z4 1266 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 CALM1P0DP23 149 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 CALM2P0DP24 149 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 CALM3P0DP25 149 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 CDC25BP30305 580 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 BCAMP50895 628 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 CEBPZQ03701 1054 aaKnown RBP10.38□□□□□ -0.75
TMEM116-209ENST00000550020 WTAPQ15007 396 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 ANO6Q4KMQ2 910 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 MYSM1Q5VVJ2 828 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 SPTY2D1Q68D10 685 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-209ENST00000550020 CKAP2LQ8IYA6 745 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 LINC00301Q8NCQ3 95 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 TDRD7Q8NHU6 1098 aaKnown RBP10.38□□□□□ -0.75
TMEM116-209ENST00000550020 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 SDF4Q9BRK5 362 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 BRIP1Q9BX63 1249 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 LY9Q9HBG7 655 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 TOMM22Q9NS69 142 aa10.38□□□□□ -0.75
TMEM116-209ENST00000550020 HOOK1Q9UJC3 728 aaKnown RBP10.38□□□□□ -0.75
TMEM116-209ENST00000550020 LAMA4Q16363 1823 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 BECN2A8MW95 431 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 PPP6R2O75170 966 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 IFNAR1P17181 557 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 CMA1P23946 247 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 FOSBP53539 338 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 AKAP17AQ02040 695 aaKnown RBP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 GUCY1B3Q02153 619 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 KIF23Q02241 960 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 FAM98CQ17RN3 349 aaKnown RBP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 CYB5R4Q7L1T6 521 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 CERS3Q8IU89 383 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 TIAM2Q8IVF5 1701 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 CCDC34Q96HJ3 373 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 TIGD1Q96MW7 591 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 CBX8Q9HC52 389 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
TMEM116-209ENST00000550020 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM116-209ENST00000550020 NEDD4P46934 1319 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 COL5A3P25940 1745 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-209ENST00000550020 NEMFO60524 1076 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 DEXIO95424 95 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 RPS8P62241 208 aaKnown RBP10.36□□□□□ -0.75
TMEM116-209ENST00000550020 PPARAQ07869 468 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 SLC39A14Q15043 492 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 RTN1Q16799 776 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 KRT40Q6A162 431 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 SARM1Q6SZW1 724 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 MICU3Q86XE3 530 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 DRC7Q8IY82 874 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 FNBP4Q8N3X1 1017 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-209ENST00000550020 LCORLQ8N3X6 602 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 ENGASEQ8NFI3 743 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 PIBF1Q8WXW3 757 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 TRIM5Q9C035 493 aa10.36□□□□□ -0.75
TMEM116-209ENST00000550020 EPB41L4AQ9HCS5 686 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-209ENST00000550020 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms