RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 ZNF765Q7L2R6 523 aa8.04□□□□□ -1.12
ATP2B1-206ENST00000549727 CITED4Q96RK1 184 aa8.04□□□□□ -1.12
ATP2B1-206ENST00000549727 CCDC86Q9H6F5 360 aaKnown RBP8.04□□□□□ -1.12
ATP2B1-206ENST00000549727 CYP26A1O43174 497 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 CSRNP1Q96S65 589 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 CORO1BQ9BR76 489 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 ZC3H7BQ9UGR2 993 aaKnown RBP8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 AP4E1Q9UPM8 1137 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 ZNF862O60290 1169 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 GADD45BO75293 160 aaPredicted RBP8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 NEFLP07196 543 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 TMC1Q8TDI8 760 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 DNAJC25Q9H1X3 360 aa8.03□□□□□ -1.12
ATP2B1-206ENST00000549727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.02□□□□□ -1.13
ATP2B1-206ENST00000549727 TMPRSS2O15393 492 aa8.02□□□□□ -1.13
ATP2B1-206ENST00000549727 PRNPP04156 253 aa8.02□□□□□ -1.13
ATP2B1-206ENST00000549727 PDE3AQ14432 1141 aa8.02□□□□□ -1.13
ATP2B1-206ENST00000549727 GIMAP7Q8NHV1 300 aa8.02□□□□□ -1.13
ATP2B1-206ENST00000549727 PAX4O43316 350 aa8.01□□□□□ -1.13
ATP2B1-206ENST00000549727 RBCK1Q9BYM8 510 aa8.01□□□□□ -1.13
ATP2B1-206ENST00000549727 DAGLAQ9Y4D2 1042 aa8.01□□□□□ -1.13
ATP2B1-206ENST00000549727 PCDHGC5Q9Y5F6 944 aa8.01□□□□□ -1.13
ATP2B1-206ENST00000549727 SOWAHDA6NJG2 315 aa8□□□□□ -1.13
ATP2B1-206ENST00000549727 MAP7Q14244 749 aa8□□□□□ -1.13
ATP2B1-206ENST00000549727 WFDC3Q8IUB2 231 aa8□□□□□ -1.13
ATP2B1-206ENST00000549727 ALKBH8Q96BT7 664 aaKnown RBP8□□□□□ -1.13
ATP2B1-206ENST00000549727 METTL22Q9BUU2 404 aaPredicted RBP8□□□□□ -1.13
ATP2B1-206ENST00000549727 LRRC4CQ9HCJ2 640 aa8□□□□□ -1.13
ATP2B1-206ENST00000549727 CRIM1Q9NZV1 1036 aa8□□□□□ -1.13
ATP2B1-206ENST00000549727 U3KQE9 123 aa8□□□□□ -1.13
ATP2B1-206ENST00000549727 CPSF6Q16630 551 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATP2B1-206ENST00000549727 CBLL1Q75N03 491 aa7.99□□□□□ -1.13
ATP2B1-206ENST00000549727 TMC7Q7Z402 723 aa7.99□□□□□ -1.13
ATP2B1-206ENST00000549727 PDZD3Q86UT5 571 aa7.99□□□□□ -1.13
ATP2B1-206ENST00000549727 YIPF2Q9BWQ6 316 aa7.99□□□□□ -1.13
ATP2B1-206ENST00000549727 DISC1Q9NRI5 854 aa7.99□□□□□ -1.13
ATP2B1-206ENST00000549727 EIF4EBP3O60516 100 aaPredicted RBP7.98□□□□□ -1.13
ATP2B1-206ENST00000549727 FCGRTP55899 365 aa7.98□□□□□ -1.13
ATP2B1-206ENST00000549727 RPS26P11Q5JNZ5 115 aaPredicted RBP7.98□□□□□ -1.13
ATP2B1-206ENST00000549727 OGFOD3Q6PK18 319 aa7.98□□□□□ -1.13
ATP2B1-206ENST00000549727 FANCD2OSQ96PS1 177 aa7.98□□□□□ -1.13
ATP2B1-206ENST00000549727 RNF114Q9Y508 228 aa7.98□□□□□ -1.13
ATP2B1-206ENST00000549727 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
ATP2B1-206ENST00000549727 DSC3Q14574 896 aa7.97□□□□□ -1.13
ATP2B1-206ENST00000549727 MPRIPQ6WCQ1 1025 aa7.97□□□□□ -1.13
ATP2B1-206ENST00000549727 PAK6Q9NQU5 681 aaPredicted RBP7.97□□□□□ -1.13
ATP2B1-206ENST00000549727 SYNGAP1Q96PV0 1343 aa7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 CDK5R2Q13319 367 aa7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 ZNF574Q6ZN55 896 aaPredicted RBP7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 SPRED2Q7Z698 418 aa7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 DDX54Q8TDD1 881 aaKnown RBP7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 BCO2Q9BYV7 579 aa7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 ZFYVE1Q9HBF4 777 aa7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 BSDC1Q9NW68 430 aaPredicted RBP7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 ANGEL1Q9UNK9 670 aaKnown RBP7.96□□□□□ -1.13
ATP2B1-206ENST00000549727 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 BNIP3Q12983 259 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 NXPE4Q6UWF7 544 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 VSIG10LQ86VR7 867 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 TP53INP2Q8IXH6 220 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 CCER1Q8TC90 406 aaPredicted RBP7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 DMRTB1Q96MA1 342 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 DTHD1Q6ZMT9 781 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 SETDB2Q96T68 719 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
ATP2B1-206ENST00000549727 LEFTY1O75610 366 aa7.94□□□□□ -1.14
ATP2B1-206ENST00000549727 TXKP42681 527 aa7.94□□□□□ -1.14
ATP2B1-206ENST00000549727 BCL7CQ8WUZ0 217 aaPredicted RBP7.94□□□□□ -1.14
ATP2B1-206ENST00000549727 GPN3Q9UHW5 284 aaPredicted RBP7.94□□□□□ -1.14
ATP2B1-206ENST00000549727 NEFMP07197 916 aa7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 ID3Q02535 119 aa7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 FAM181AQ8N9Y4 354 aa7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 FLCNQ8NFG4 579 aa7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 KCNB2Q92953 911 aa7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 TMEM39AQ9NV64 488 aa7.93□□□□□ -1.14
ATP2B1-206ENST00000549727 SHROOM4Q9ULL8 1493 aa7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 FAM87AP0C7U9 286 aa7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 SMYD4Q8IYR2 804 aaPredicted RBP7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 GRIN3AQ8TCU5 1115 aa7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 FBXL18Q96ME1 805 aa7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 DCTN4Q9UJW0 460 aa7.92□□□□□ -1.14
ATP2B1-206ENST00000549727 RBAK-RBAKDNI3L0D1 243 aa7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 CD96P40200 585 aa7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 CYP27A1Q02318 531 aa7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 PLD6Q8N2A8 252 aaKnown RBP7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 KRT82Q9NSB4 513 aa7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 NLRP2Q9NX02 1062 aa7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
ATP2B1-206ENST00000549727 GNEQ9Y223 722 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms