RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 F8W031 263 aaPredicted RBP10.76□□□□□ -0.69
TROAP-208ENST00000548817 PDHXO00330 501 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 BCRP11274 1271 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 ITGA6P23229 1130 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 FLIIQ13045 1269 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 GCKRQ14397 625 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 ZNF804AQ7Z570 1209 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 DNAAF4Q8WXU2 420 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
TROAP-208ENST00000548817 AOX1Q06278 1338 aa10.76□□□□□ -0.69
TROAP-208ENST00000548817 G2E3Q7L622 706 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 LINS1Q8NG48 757 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 WRNIP1Q96S55 665 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 PLA2G12BQ9BX93 195 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 KCNH4Q9UQ05 1017 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 IL16Q14005 1332 aa10.75□□□□□ -0.69
TROAP-208ENST00000548817 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
TROAP-208ENST00000548817 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
TROAP-208ENST00000548817 FLT3LGP49771 235 aa10.74□□□□□ -0.69
TROAP-208ENST00000548817 IFIT5Q13325 482 aaKnown RBP10.74□□□□□ -0.69
TROAP-208ENST00000548817 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
TROAP-208ENST00000548817 ZNF697Q5TEC3 545 aa10.74□□□□□ -0.69
TROAP-208ENST00000548817 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
TROAP-208ENST00000548817 MAFAQ8NHW3 353 aaPredicted RBP10.74□□□□□ -0.69
TROAP-208ENST00000548817 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
TROAP-208ENST00000548817 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.74□□□□□ -0.69
TROAP-208ENST00000548817 NCOR1O75376 2440 aa10.73□□□□□ -0.69
TROAP-208ENST00000548817 CSF1RP07333 972 aa10.73□□□□□ -0.69
TROAP-208ENST00000548817 ELNP15502 786 aa10.73□□□□□ -0.69
TROAP-208ENST00000548817 HOXD11P31277 338 aaPredicted RBP10.73□□□□□ -0.69
TROAP-208ENST00000548817 ZEB1P37275 1124 aaPredicted RBP10.73□□□□□ -0.69
TROAP-208ENST00000548817 CHRNDQ07001 517 aa10.73□□□□□ -0.69
TROAP-208ENST00000548817 DCAF15Q66K64 600 aa10.73□□□□□ -0.69
TROAP-208ENST00000548817 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
TROAP-208ENST00000548817 DIS3LQ8TF46 1054 aaKnown RBP10.73□□□□□ -0.69
TROAP-208ENST00000548817 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
TROAP-208ENST00000548817 GABRQQ9UN88 632 aa10.73□□□□□ -0.69
TROAP-208ENST00000548817 RPAP1Q9BWH6 1393 aaPredicted RBP10.73□□□□□ -0.69
TROAP-208ENST00000548817 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
TROAP-208ENST00000548817 BDP1A6H8Y1 2624 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 TCP10L2B9ZVM9 353 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 TNFRSF10AO00220 468 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 SYN1P17600 705 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 CCDC57Q2TAC2 916 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
TROAP-208ENST00000548817 FKBP1CQ5VVH2 108 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 FAM83AQ86UY5 434 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.72□□□□□ -0.69
TROAP-208ENST00000548817 ZKSCAN4Q969J2 545 aaPredicted RBP10.72□□□□□ -0.69
TROAP-208ENST00000548817 C11orf49Q9H6J7 331 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 TTF2Q9UNY4 1162 aaKnown RBP10.72□□□□□ -0.69
TROAP-208ENST00000548817 SALL2Q9Y467 1007 aaPredicted RBP10.72□□□□□ -0.69
TROAP-208ENST00000548817 A0A1B0GUL6 1792 aa10.72□□□□□ -0.69
TROAP-208ENST00000548817 TNPO2O14787 897 aaKnown RBP10.71□□□□□ -0.69
TROAP-208ENST00000548817 PLIN1O60240 522 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 TAF5LO75529 589 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 HDLBPQ00341 1268 aaKnown RBP10.71□□□□□ -0.69
TROAP-208ENST00000548817 MOGSQ13724 837 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 TJAP1Q5JTD0 557 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 WDR63Q8IWG1 891 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 PIEZO1Q92508 2521 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
TROAP-208ENST00000548817 ZNF341Q9BYN7 854 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 MRS2Q9HD23 443 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 CNNM1Q9NRU3 951 aa10.71□□□□□ -0.69
TROAP-208ENST00000548817 C9orf78Q9NZ63 289 aaPredicted RBP10.71□□□□□ -0.69
TROAP-208ENST00000548817 FANCIQ9NVI1 1328 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 CXCL11O14625 94 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 VAMP4O75379 141 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 HMGCRP04035 888 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 CASP7P55210 303 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 MFSD14BQ5SR56 506 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 LDHAL6AQ6ZMR3 332 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 COA7Q96BR5 231 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 OGDHLQ9ULD0 1010 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
TROAP-208ENST00000548817 ANP32CO43423 234 aa10.69□□□□□ -0.7
TROAP-208ENST00000548817 CRKP46108 304 aa10.69□□□□□ -0.7
TROAP-208ENST00000548817 EXOSC9Q06265 439 aaKnown RBP10.69□□□□□ -0.7
TROAP-208ENST00000548817 LMBR1LQ6UX01 489 aa10.69□□□□□ -0.7
TROAP-208ENST00000548817 FASTKD5Q7L8L6 764 aaKnown RBP10.69□□□□□ -0.7
TROAP-208ENST00000548817 FAM161BQ96MY7 647 aa10.69□□□□□ -0.7
TROAP-208ENST00000548817 HMX1Q9NP08 348 aaPredicted RBP10.69□□□□□ -0.7
TROAP-208ENST00000548817 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
TROAP-208ENST00000548817 F6X3S4 739 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 CYP2C8P10632 490 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 FOXO4P98177 505 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 CCDC184Q52MB2 194 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 NOL9Q5SY16 702 aaKnown RBP10.68□□□□□ -0.7
TROAP-208ENST00000548817 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 SLC4A10Q6U841 1118 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 LBHD1Q9BQE6 289 aaPredicted RBP10.68□□□□□ -0.7
TROAP-208ENST00000548817 ZNF112Q9UJU3 913 aa10.68□□□□□ -0.7
TROAP-208ENST00000548817 PFASO15067 1338 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms