RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
CCDC38-206ENST00000548771 CORO1BQ9BR76 489 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.93□□□□□ -1.14
CCDC38-206ENST00000548771 RXRBP28702 533 aa7.93□□□□□ -1.14
CCDC38-206ENST00000548771 ENOX2Q16206 610 aaKnown RBP7.93□□□□□ -1.14
CCDC38-206ENST00000548771 PAOXQ6QHF9 649 aa7.93□□□□□ -1.14
CCDC38-206ENST00000548771 ZAR1Q86SH2 424 aa7.93□□□□□ -1.14
CCDC38-206ENST00000548771 BCO2Q9BYV7 579 aa7.93□□□□□ -1.14
CCDC38-206ENST00000548771 SEMA6CQ9H3T2 930 aa7.93□□□□□ -1.14
CCDC38-206ENST00000548771 FAM105AQ9NUU6 356 aa7.93□□□□□ -1.14
CCDC38-206ENST00000548771 PLCB3Q01970 1234 aa7.92□□□□□ -1.14
CCDC38-206ENST00000548771 MSMPQ1L6U9 139 aa7.92□□□□□ -1.14
CCDC38-206ENST00000548771 NFXL1Q6ZNB6 911 aa7.92□□□□□ -1.14
CCDC38-206ENST00000548771 PDZD3Q86UT5 571 aa7.92□□□□□ -1.14
CCDC38-206ENST00000548771 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
CCDC38-206ENST00000548771 BIN2Q9UBW5 565 aaPredicted RBP7.92□□□□□ -1.14
CCDC38-206ENST00000548771 PPP1R9AQ9ULJ8 1098 aa7.92□□□□□ -1.14
CCDC38-206ENST00000548771 PCDHGC5Q9Y5F6 944 aa7.92□□□□□ -1.14
CCDC38-206ENST00000548771 ZNF862O60290 1169 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 NFICP08651 508 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 FOSL1P15407 271 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 AKAP4Q5JQC9 854 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 LCE4AQ5TA78 99 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 FBXL6Q8N531 539 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 CCDC86Q9H6F5 360 aaKnown RBP7.91□□□□□ -1.14
CCDC38-206ENST00000548771 C1GALT1Q9NS00 363 aa7.91□□□□□ -1.14
CCDC38-206ENST00000548771 TMPRSS2O15393 492 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 C8AP07357 584 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 XRCC5P13010 732 aaKnown RBP7.9□□□□□ -1.14
CCDC38-206ENST00000548771 ZNF157P51786 506 aaPredicted RBP7.9□□□□□ -1.14
CCDC38-206ENST00000548771 FCGRTP55899 365 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
CCDC38-206ENST00000548771 COL19A1Q14993 1142 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 DYMQ7RTS9 669 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 YIPF2Q9BWQ6 316 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 KRT82Q9NSB4 513 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 ATG3Q9NT62 314 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 NLRP2Q9NX02 1062 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.14
CCDC38-206ENST00000548771 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 LIG1P18858 919 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 MAPK1P28482 360 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 MAP7Q14244 749 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 KIF4BQ2VIQ3 1234 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC38-206ENST00000548771 NXPE4Q6UWF7 544 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 DTHD1Q6ZMT9 781 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 GIMAP7Q8NHV1 300 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 TBC1D32Q96NH3 1257 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 KRTAP4-2Q9BYR5 136 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 TMEM39AQ9NV64 488 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 LEMD3Q9Y2U8 911 aa7.89□□□□□ -1.15
CCDC38-206ENST00000548771 DYNC1LI2O43237 492 aaPredicted RBP7.88□□□□□ -1.15
CCDC38-206ENST00000548771 GSTP1P09211 210 aaKnown RBP7.88□□□□□ -1.15
CCDC38-206ENST00000548771 ASPAP45381 313 aa7.88□□□□□ -1.15
CCDC38-206ENST00000548771 KCNA1Q09470 495 aa7.88□□□□□ -1.15
CCDC38-206ENST00000548771 STK35Q8TDR2 534 aa7.88□□□□□ -1.15
CCDC38-206ENST00000548771 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
CCDC38-206ENST00000548771 METTL22Q9BUU2 404 aaPredicted RBP7.88□□□□□ -1.15
CCDC38-206ENST00000548771 PPP4R2Q9NY27 417 aa7.88□□□□□ -1.15
CCDC38-206ENST00000548771 CCDC39Q9UFE4 941 aa7.88□□□□□ -1.15
CCDC38-206ENST00000548771 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
CCDC38-206ENST00000548771 FAM170BA6NMN3 283 aa7.87□□□□□ -1.15
CCDC38-206ENST00000548771 PRNPP04156 253 aa7.87□□□□□ -1.15
CCDC38-206ENST00000548771 PDE3AQ14432 1141 aa7.87□□□□□ -1.15
CCDC38-206ENST00000548771 CBLL1Q75N03 491 aa7.87□□□□□ -1.15
CCDC38-206ENST00000548771 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
CCDC38-206ENST00000548771 IVNS1ABPQ9Y6Y0 642 aa7.87□□□□□ -1.15
CCDC38-206ENST00000548771 RAB6AP20340 208 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 ZNF252P-AS1Q0IIN9 211 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 FBF1Q8TES7 1133 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 ANKRD24Q8TF21 1146 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 OSBPL7Q9BZF2 842 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 AP4E1Q9UPM8 1137 aa7.86□□□□□ -1.15
CCDC38-206ENST00000548771 NECAB3Q96P71 396 aaPredicted RBP7.85□□□□□ -1.15
CCDC38-206ENST00000548771 SETDB2Q96T68 719 aa7.85□□□□□ -1.15
CCDC38-206ENST00000548771 ZC3H12CQ9C0D7 883 aaKnown RBP7.85□□□□□ -1.15
CCDC38-206ENST00000548771 SLFN14P0C7P3 912 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 BMP6P22004 513 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 ARNTP27540 789 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 PPP2R3AQ06190 1150 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 OGFOD3Q6PK18 319 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 ZNF765Q7L2R6 523 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 TP53INP2Q8IXH6 220 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 POU5F2Q8N7G0 328 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 SRCIN1Q9C0H9 1055 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 GPN3Q9UHW5 284 aaPredicted RBP7.84□□□□□ -1.15
CCDC38-206ENST00000548771 WWC3Q9ULE0 1092 aa7.84□□□□□ -1.15
CCDC38-206ENST00000548771 CYP26A1O43174 497 aa7.83□□□□□ -1.16
CCDC38-206ENST00000548771 NME2P22392 152 aa7.83□□□□□ -1.16
CCDC38-206ENST00000548771 ID3Q02535 119 aa7.83□□□□□ -1.16
CCDC38-206ENST00000548771 ZSCAN29Q8IWY8 852 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms