RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 OTUD7BQ6GQQ9 843 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 WNK4Q96J92 1243 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 MYH13Q9UKX3 1938 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 SSC5DA1L4H1 1573 aa14.05□□□□□ -0.16
BEST3-209ENST00000548658 PRDX5P30044 214 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 DGKZQ13574 1117 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 RASGRF1Q13972 1273 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 GPR108Q9NPR9 543 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 DAGLAQ9Y4D2 1042 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 CSADQ9Y600 493 aa14.04□□□□□ -0.16
BEST3-209ENST00000548658 SURF6O75683 361 aaKnown RBP14.03□□□□□ -0.16
BEST3-209ENST00000548658 CACNB3P54284 484 aa14.03□□□□□ -0.16
BEST3-209ENST00000548658 OS9Q13438 667 aaPredicted RBP14.03□□□□□ -0.16
BEST3-209ENST00000548658 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
BEST3-209ENST00000548658 DZIP1Q86YF9 867 aaKnown RBP14.03□□□□□ -0.16
BEST3-209ENST00000548658 FAM151AQ8WW52 585 aa14.03□□□□□ -0.16
BEST3-209ENST00000548658 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
BEST3-209ENST00000548658 MCOLN1Q9GZU1 580 aa14.03□□□□□ -0.16
BEST3-209ENST00000548658 CHMP4BQ9H444 224 aaKnown RBP14.03□□□□□ -0.16
BEST3-209ENST00000548658 ABCF2Q9UG63 623 aa14.03□□□□□ -0.16
BEST3-209ENST00000548658 RPAP1Q9BWH6 1393 aaPredicted RBP14.02□□□□□ -0.17
BEST3-209ENST00000548658 TBC1D8O95759 1140 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 UQCRFS1P1P0C7P4 283 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 PKN2Q16513 984 aaKnown RBP14.02□□□□□ -0.17
BEST3-209ENST00000548658 CDC42EP5Q6NZY7 148 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.02□□□□□ -0.17
BEST3-209ENST00000548658 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 SPATA5Q8NB90 893 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.02□□□□□ -0.17
BEST3-209ENST00000548658 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
BEST3-209ENST00000548658 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.02□□□□□ -0.17
BEST3-209ENST00000548658 GPR25O00155 361 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 IGSF3O75054 1194 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 LDHCP07864 332 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 RLBP1P12271 317 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 GSTO1P78417 241 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 VGLL4Q14135 290 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 CCDC158Q5M9N0 1113 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 CTU1Q7Z7A3 348 aaKnown RBP14.01□□□□□ -0.17
BEST3-209ENST00000548658 OPTNQ96CV9 577 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 ELP3Q9H9T3 547 aa14.01□□□□□ -0.17
BEST3-209ENST00000548658 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
BEST3-209ENST00000548658 GAKO14976 1311 aa14□□□□□ -0.17
BEST3-209ENST00000548658 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
BEST3-209ENST00000548658 CCDC85CA6NKD9 419 aa14□□□□□ -0.17
BEST3-209ENST00000548658 MAP4K4O95819 1239 aaPredicted RBP14□□□□□ -0.17
BEST3-209ENST00000548658 ARID4AP29374 1257 aaPredicted RBP14□□□□□ -0.17
BEST3-209ENST00000548658 GTF2A2P52657 109 aa14□□□□□ -0.17
BEST3-209ENST00000548658 CDAN1Q8IWY9 1227 aa14□□□□□ -0.17
BEST3-209ENST00000548658 WRNIP1Q96S55 665 aa14□□□□□ -0.17
BEST3-209ENST00000548658 IDI2Q9BXS1 227 aa14□□□□□ -0.17
BEST3-209ENST00000548658 ZNF341Q9BYN7 854 aa14□□□□□ -0.17
BEST3-209ENST00000548658 HMG20BQ9P0W2 317 aa14□□□□□ -0.17
BEST3-209ENST00000548658 FKTNO75072 461 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 ENTPD3O75355 529 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 WDHD1O75717 1129 aaPredicted RBP13.99□□□□□ -0.17
BEST3-209ENST00000548658 TCP10Q12799 353 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 TNNI3KQ59H18 835 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 ERO1BQ86YB8 467 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 ZNF296Q8WUU4 475 aaPredicted RBP13.99□□□□□ -0.17
BEST3-209ENST00000548658 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 DDX19BQ9UMR2 479 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.99□□□□□ -0.17
BEST3-209ENST00000548658 FPGT-TNNI3KV9GXZ4 949 aa13.99□□□□□ -0.17
BEST3-209ENST00000548658 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 MECOMQ03112 1051 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 NFIAQ12857 509 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 TTC39AQ5SRH9 613 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 MIGA2Q7L4E1 593 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 PANK1Q8TE04 598 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 ZNF512BQ96KM6 892 aaPredicted RBP13.98□□□□□ -0.17
BEST3-209ENST00000548658 LRP2BPQ9P2M1 347 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 RCAN3Q9UKA8 241 aa13.98□□□□□ -0.17
BEST3-209ENST00000548658 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
BEST3-209ENST00000548658 GJA5P36382 358 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 BTDP43251 543 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 PPATQ06203 517 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
BEST3-209ENST00000548658 OTUD5Q96G74 571 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 RAI14Q9P0K7 980 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 FAM198AQ9UFP1 575 aa13.97□□□□□ -0.17
BEST3-209ENST00000548658 MYH2Q9UKX2 1941 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 HMMRO75330 724 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 CETPP11597 493 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 MCAMP43121 646 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 RGS3P49796 1198 aa13.96□□□□□ -0.17
BEST3-209ENST00000548658 SNAPC2Q13487 334 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms