RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 HDAC9Q9UKV0 1011 aa34.43■■■■□ 3.1
BRF1-213ENST00000548421 CDK5RAP2Q96SN8 1893 aa34.42■■■■□ 3.1
BRF1-213ENST00000548421 FOXP2O15409 715 aa34.41■■■■□ 3.1
BRF1-213ENST00000548421 MCCP23508 829 aa34.41■■■■□ 3.1
BRF1-213ENST00000548421 OGFOD1Q8N543 542 aa34.41■■■■□ 3.1
BRF1-213ENST00000548421 ZDHHC15Q96MV8 337 aa34.41■■■■□ 3.1
BRF1-213ENST00000548421 RBM8AQ9Y5S9 174 aaKnown RBP34.41■■■■□ 3.1
BRF1-213ENST00000548421 GJA3Q9Y6H8 435 aa34.41■■■■□ 3.1
BRF1-213ENST00000548421 SLC4A4Q9Y6R1 1079 aa34.41■■■■□ 3.1
BRF1-213ENST00000548421 U3KPZ7 1027 aaPredicted RBP34.41■■■■□ 3.1
BRF1-213ENST00000548421 RPAP1Q9BWH6 1393 aaPredicted RBP34.41■■■■□ 3.1
BRF1-213ENST00000548421 PATL2C9JE40 543 aaKnown RBP34.4■■■■□ 3.1
BRF1-213ENST00000548421 USP17L8P0C7I0 530 aa34.4■■■■□ 3.1
BRF1-213ENST00000548421 PLCG2P16885 1265 aa34.4■■■■□ 3.1
BRF1-213ENST00000548421 CRNKL1Q9BZJ0 848 aaKnown RBP34.4■■■■□ 3.1
BRF1-213ENST00000548421 TSHZ2Q9NRE2 1034 aa34.4■■■■□ 3.1
BRF1-213ENST00000548421 ECM29Q5VYK3 1845 aa34.4■■■■□ 3.1
BRF1-213ENST00000548421 RBM25P49756 843 aaKnown RBP34.39■■■■□ 3.1
BRF1-213ENST00000548421 MMP14P50281 582 aa34.39■■■■□ 3.1
BRF1-213ENST00000548421 APPP05067 770 aa34.39■■■■□ 3.1
BRF1-213ENST00000548421 FOCADQ5VW36 1801 aa34.38■■■■□ 3.09
BRF1-213ENST00000548421 PRKAB2O43741 272 aa34.38■■■■□ 3.09
BRF1-213ENST00000548421 HSPA4P34932 840 aa34.38■■■■□ 3.09
BRF1-213ENST00000548421 RBM5P52756 815 aaKnown RBP eCLIP34.38■■■■□ 3.09
BRF1-213ENST00000548421 GPC2Q8N158 579 aa34.38■■■■□ 3.09
BRF1-213ENST00000548421 SH3RF3Q8TEJ3 882 aaPredicted RBP34.38■■■■□ 3.09
BRF1-213ENST00000548421 DPF2Q92785 391 aa34.38■■■■□ 3.09
BRF1-213ENST00000548421 GSG1L2A8MUP6 293 aa34.37■■■■□ 3.09
BRF1-213ENST00000548421 GMPSP49915 693 aaPredicted RBP34.37■■■■□ 3.09
BRF1-213ENST00000548421 APOBEC3HQ6NTF7 200 aaKnown RBP34.37■■■■□ 3.09
BRF1-213ENST00000548421 ZMYM6O95789 1325 aa34.36■■■■□ 3.09
BRF1-213ENST00000548421 NECTIN1Q15223 517 aa34.36■■■■□ 3.09
BRF1-213ENST00000548421 CFAP100Q494V2 611 aa34.36■■■■□ 3.09
BRF1-213ENST00000548421 SDR42E1Q8WUS8 393 aa34.36■■■■□ 3.09
BRF1-213ENST00000548421 NACAP1Q9BZK3 213 aa34.36■■■■□ 3.09
BRF1-213ENST00000548421 ZC3H4Q9UPT8 1303 aaKnown RBP34.35■■■■□ 3.09
BRF1-213ENST00000548421 RHBDL3P58872 404 aa34.35■■■■□ 3.09
BRF1-213ENST00000548421 EPB41L4AQ9HCS5 686 aaPredicted RBP34.35■■■■□ 3.09
BRF1-213ENST00000548421 CTNNA3Q9UI47 895 aa34.35■■■■□ 3.09
BRF1-213ENST00000548421 LAMA4Q16363 1823 aa34.35■■■■□ 3.09
BRF1-213ENST00000548421 NAV1Q8NEY1 1877 aa34.35■■■■□ 3.09
BRF1-213ENST00000548421 FGAP02671 866 aa34.34■■■■□ 3.09
BRF1-213ENST00000548421 ALX1Q15699 326 aa34.34■■■■□ 3.09
BRF1-213ENST00000548421 IFNL3Q8IZI9 196 aa34.34■■■■□ 3.09
BRF1-213ENST00000548421 BAZ2AQ9UIF9 1905 aaKnown RBP34.34■■■■□ 3.09
BRF1-213ENST00000548421 GIMAP6Q6P9H5 292 aa34.33■■■■□ 3.09
BRF1-213ENST00000548421 TEX11Q8IYF3 940 aa34.33■■■■□ 3.09
BRF1-213ENST00000548421 ATP8A2Q9NTI2 1148 aa34.33■■■■□ 3.09
BRF1-213ENST00000548421 ZNF280AP59817 542 aaPredicted RBP34.33■■■■□ 3.09
BRF1-213ENST00000548421 RNF20Q5VTR2 975 aa34.33■■■■□ 3.09
BRF1-213ENST00000548421 NAPBQ9H115 298 aa34.33■■■■□ 3.09
BRF1-213ENST00000548421 PCDHAC2Q9Y5I4 1007 aa34.33■■■■□ 3.09
BRF1-213ENST00000548421 TDO2P48775 406 aa34.32■■■■□ 3.08
BRF1-213ENST00000548421 CREB3L3Q68CJ9 461 aa34.32■■■■□ 3.08
BRF1-213ENST00000548421 MTMR14Q8NCE2 650 aa34.32■■■■□ 3.08
BRF1-213ENST00000548421 USP5P45974 858 aa34.31■■■■□ 3.08
BRF1-213ENST00000548421 DLGAP5Q15398 846 aa34.31■■■■□ 3.08
BRF1-213ENST00000548421 CDC42EP5Q6NZY7 148 aa34.31■■■■□ 3.08
BRF1-213ENST00000548421 DDRGK1Q96HY6 314 aa34.31■■■■□ 3.08
BRF1-213ENST00000548421 USP40Q9NVE5 1235 aa34.31■■■■□ 3.08
BRF1-213ENST00000548421 SPDYE2BA6NHP3 402 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 SLC27A2O14975 620 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 SPDYE6P0CI01 402 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 ANAPC15P60006 121 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 MICALL2Q8IY33 904 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 KCNB2Q92953 911 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 MYOZ2Q9NPC6 264 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 DCP1AQ9NPI6 582 aaPredicted RBP34.3■■■■□ 3.08
BRF1-213ENST00000548421 PALD1Q9ULE6 856 aa34.3■■■■□ 3.08
BRF1-213ENST00000548421 TGFBRAP1Q8WUH2 860 aa34.29■■■■□ 3.08
BRF1-213ENST00000548421 CNOT7Q9UIV1 285 aaKnown RBP34.29■■■■□ 3.08
BRF1-213ENST00000548421 LAMB1P07942 1786 aa34.29■■■■□ 3.08
BRF1-213ENST00000548421 DCAF8L1A6NGE4 600 aa34.28■■■■□ 3.08
BRF1-213ENST00000548421 ZKSCAN1P17029 563 aaPredicted RBP34.28■■■■□ 3.08
BRF1-213ENST00000548421 IMMTQ16891 758 aaKnown RBP34.28■■■■□ 3.08
BRF1-213ENST00000548421 PRMT6Q96LA8 375 aaPredicted RBP34.28■■■■□ 3.08
BRF1-213ENST00000548421 DDX60LQ5H9U9 1706 aaKnown RBP34.28■■■■□ 3.08
BRF1-213ENST00000548421 SHTN1A0MZ66 631 aa34.27■■■■□ 3.08
BRF1-213ENST00000548421 MYH1P12882 1939 aa34.27■■■■□ 3.08
BRF1-213ENST00000548421 DDNO94850 711 aaPredicted RBP34.27■■■■□ 3.08
BRF1-213ENST00000548421 CYP21A2P08686 494 aa34.27■■■■□ 3.08
BRF1-213ENST00000548421 DPY19L2Q6NUT2 758 aa34.27■■■■□ 3.08
BRF1-213ENST00000548421 GPRC5DQ9NZD1 345 aa34.27■■■■□ 3.08
BRF1-213ENST00000548421 MKRN1Q9UHC7 482 aaKnown RBP34.27■■■■□ 3.08
BRF1-213ENST00000548421 RASEFQ8IZ41 740 aa34.26■■■■□ 3.07
BRF1-213ENST00000548421 ZBED3Q96IU2 234 aaPredicted RBP34.26■■■■□ 3.07
BRF1-213ENST00000548421 SNX14Q9Y5W7 946 aa34.26■■■■□ 3.07
BRF1-213ENST00000548421 FLT1P17948 1338 aa34.25■■■■□ 3.07
BRF1-213ENST00000548421 H7C1D1 291 aa34.25■■■■□ 3.07
BRF1-213ENST00000548421 WDHD1O75717 1129 aaPredicted RBP34.25■■■■□ 3.07
BRF1-213ENST00000548421 MAPKAPK5Q8IW41 473 aa34.25■■■■□ 3.07
BRF1-213ENST00000548421 IL17RAQ96F46 866 aa34.25■■■■□ 3.07
BRF1-213ENST00000548421 ZNF213O14771 459 aa34.24■■■■□ 3.07
BRF1-213ENST00000548421 TDRD3Q9H7E2 651 aaKnown RBP34.24■■■■□ 3.07
BRF1-213ENST00000548421 TSGA10IPQ3SY00 556 aa34.23■■■■□ 3.07
BRF1-213ENST00000548421 KIF2CQ99661 725 aa34.23■■■■□ 3.07
BRF1-213ENST00000548421 ARPP21Q9UBL0 812 aaPredicted RBP34.23■■■■□ 3.07
BRF1-213ENST00000548421 HAND2P61296 217 aa34.22■■■■□ 3.07
BRF1-213ENST00000548421 IDI2Q9BXS1 227 aa34.22■■■■□ 3.07
BRF1-213ENST00000548421 MCM9Q9NXL9 1143 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms