RNA–Protein interactions for RNA: ENST00000547461.2

TCTN1-220, Transcript of tectonic family member 1, humanhuman

TSL 3

Gene TCTN1, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-220ENST00000547461 VAC14Q08AM6 782 aa8.74□□□□□ -1.01
TCTN1-220ENST00000547461 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
TCTN1-220ENST00000547461 ABT1Q9ULW3 272 aaKnown RBP8.74□□□□□ -1.01
TCTN1-220ENST00000547461 VIRMAQ69YN4 1812 aaKnown RBP8.74□□□□□ -1.01
TCTN1-220ENST00000547461 MRC1P22897 1456 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 EPHX2P34913 555 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 KRT76Q01546 638 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 FKBP4Q02790 459 aaKnown RBP eCLIP8.73□□□□□ -1.01
TCTN1-220ENST00000547461 GRM1Q13255 1194 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 TPTE2Q6XPS3 522 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 PRICKLE2Q7Z3G6 844 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 RTKN2Q8IZC4 609 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 RTF1Q92541 710 aaKnown RBP8.73□□□□□ -1.01
TCTN1-220ENST00000547461 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 ARHGEF10LQ9HCE6 1279 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 NIP7Q9Y221 180 aaKnown RBP eCLIP8.73□□□□□ -1.01
TCTN1-220ENST00000547461 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 WDR33Q9C0J8 1336 aaKnown RBP8.73□□□□□ -1.01
TCTN1-220ENST00000547461 ZNF541Q9H0D2 1346 aa8.73□□□□□ -1.01
TCTN1-220ENST00000547461 MYCP01106 439 aaPredicted RBP8.72□□□□□ -1.01
TCTN1-220ENST00000547461 SOX11P35716 441 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 ZEB1P37275 1124 aaPredicted RBP8.72□□□□□ -1.01
TCTN1-220ENST00000547461 DGKZQ13574 1117 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 MAP1SQ66K74 1059 aaPredicted RBP8.72□□□□□ -1.01
TCTN1-220ENST00000547461 OLFM4Q6UX06 510 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 CLEC4GQ6UXB4 293 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 CNTROBQ8N137 903 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 SYNE4Q8N205 404 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 JDP2Q8WYK2 163 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 CFAP53Q96M91 514 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 NLRP3Q96P20 1036 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 USP16Q9Y5T5 823 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 GJA3Q9Y6H8 435 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 KIF7Q2M1P5 1343 aa8.72□□□□□ -1.01
TCTN1-220ENST00000547461 TNRC18O15417 2968 aaPredicted RBP8.72□□□□□ -1.01
TCTN1-220ENST00000547461 SNRPA1P09661 255 aaKnown RBP8.71□□□□□ -1.02
TCTN1-220ENST00000547461 LMOD1P29536 600 aaPredicted RBP8.71□□□□□ -1.02
TCTN1-220ENST00000547461 PRKAR2BP31323 418 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.02
TCTN1-220ENST00000547461 EIF6P56537 245 aaKnown RBP8.71□□□□□ -1.02
TCTN1-220ENST00000547461 SOX10P56693 466 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 TSGA10IPQ3SY00 556 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 SLFNL1Q499Z3 407 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 PNMA8AQ86V59 439 aaPredicted RBP8.71□□□□□ -1.02
TCTN1-220ENST00000547461 VWA5B2Q8N398 1253 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 NGEFQ8N5V2 710 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 GCC1Q96CN9 775 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 NUDCQ9Y266 331 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 HRH3Q9Y5N1 445 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 RNF123Q5XPI4 1314 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 PASKQ96RG2 1323 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 SCN11AQ9UI33 1791 aa8.71□□□□□ -1.02
TCTN1-220ENST00000547461 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
TCTN1-220ENST00000547461 ADAMTS7Q9UKP4 1686 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 PRAMEF22A3QJZ6 481 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 SPATA31C2B4DYI2 1134 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 TCERG1O14776 1098 aaKnown RBP8.7□□□□□ -1.02
TCTN1-220ENST00000547461 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
TCTN1-220ENST00000547461 ALDH1B1P30837 517 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
TCTN1-220ENST00000547461 MCM10Q7L590 875 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 RNF135Q8IUD6 432 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 PHACTR3Q96KR7 559 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
TCTN1-220ENST00000547461 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 CUL9Q8IWT3 2517 aa8.7□□□□□ -1.02
TCTN1-220ENST00000547461 IL2RAP01589 272 aa8.69□□□□□ -1.02
TCTN1-220ENST00000547461 RHOQP17081 205 aa8.69□□□□□ -1.02
TCTN1-220ENST00000547461 USP4Q13107 963 aa8.69□□□□□ -1.02
TCTN1-220ENST00000547461 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
TCTN1-220ENST00000547461 RPGRQ92834 1020 aaKnown RBP8.69□□□□□ -1.02
TCTN1-220ENST00000547461 TMX4Q9H1E5 349 aaPredicted RBP8.69□□□□□ -1.02
TCTN1-220ENST00000547461 CUEDC1Q9NWM3 386 aaPredicted RBP8.69□□□□□ -1.02
TCTN1-220ENST00000547461 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 NRXN2Q9P2S2 1712 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 CDC14CA4D256 554 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 RASSF10A6NK89 507 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 ECE1P42892 770 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 DCTN1Q14203 1278 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 RNFT1Q5M7Z0 435 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
TCTN1-220ENST00000547461 GPC2Q8N158 579 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 NBPF15Q8N660 670 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 XAGE2Q96GT9 111 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 NYXQ9GZU5 481 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
TCTN1-220ENST00000547461 KLRG2A4D1S0 409 aaPredicted RBP8.67□□□□□ -1.02
TCTN1-220ENST00000547461 FZD9O00144 591 aa8.67□□□□□ -1.02
TCTN1-220ENST00000547461 GPTP24298 496 aa8.67□□□□□ -1.02
TCTN1-220ENST00000547461 POU4F2Q12837 409 aa8.67□□□□□ -1.02
TCTN1-220ENST00000547461 FLIIQ13045 1269 aa8.67□□□□□ -1.02
TCTN1-220ENST00000547461 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms