RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 LINC00301Q8NCQ3 95 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 CCDC12Q8WUD4 166 aaPredicted RBP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 TLR7Q9NYK1 1049 aaKnown RBP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 N4BP1O75113 896 aaKnown RBP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 ERLIN1O75477 346 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 G3BP1Q13283 466 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
NPAS3-205ENST00000547068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
NPAS3-205ENST00000547068 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 SASH1O94885 1247 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 CYP21A2P08686 494 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 MYL5Q02045 173 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 ZNF772Q68DY9 489 aaPredicted RBP12.28□□□□□ -0.44
NPAS3-205ENST00000547068 PDILTQ8N807 584 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 KCNG4Q8TDN1 519 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
NPAS3-205ENST00000547068 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 ANKRD65E5RJM6 399 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 EXOC5O00471 708 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 MMP14P50281 582 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
NPAS3-205ENST00000547068 HSP90B2PQ58FF3 399 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 BARGINQ6ZT62 677 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 TOGARAM2Q6ZUX3 1019 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 GPATCH11Q8N954 259 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 ANKZF1Q9H8Y5 726 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 CLIC4Q9Y696 253 aa12.28□□□□□ -0.44
NPAS3-205ENST00000547068 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
NPAS3-205ENST00000547068 MEGF6O75095 1541 aa12.27□□□□□ -0.44
NPAS3-205ENST00000547068 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.44
NPAS3-205ENST00000547068 SPTLC2O15270 562 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 STX10O60499 249 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 USP5P45974 858 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 LRRC31Q6UY01 552 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 MSL3Q8N5Y2 521 aaKnown RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 NCOA5Q9HCD5 579 aaKnown RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 CUTAO60888 179 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 KARSQ15046 597 aaKnown RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 EDC3Q96F86 508 aaKnown RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 GJD4Q96KN9 370 aaPredicted RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 ABCB6Q9NP58 842 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
NPAS3-205ENST00000547068 RAB21Q9UL25 225 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 L1RE1Q9UN81 338 aa12.27□□□□□ -0.45
NPAS3-205ENST00000547068 COL15A1P39059 1388 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 POLR3DP05423 398 aaPredicted RBP12.26□□□□□ -0.45
NPAS3-205ENST00000547068 HMGB1P09429 215 aaKnown RBP12.26□□□□□ -0.45
NPAS3-205ENST00000547068 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 DHX32Q7L7V1 743 aaKnown RBP12.26□□□□□ -0.45
NPAS3-205ENST00000547068 CNNM3Q8NE01 707 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 SUGCTQ9HAC7 445 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 A0A0G2JS52 829 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 PHACTR2O75167 634 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 WDHD1O75717 1129 aaPredicted RBP12.26□□□□□ -0.45
NPAS3-205ENST00000547068 YEATS4O95619 227 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 ANXA1P04083 346 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 PFKFB1P16118 471 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
NPAS3-205ENST00000547068 CCDC129Q6ZRS4 1044 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 SUGP1Q8IWZ8 645 aaKnown RBP12.26□□□□□ -0.45
NPAS3-205ENST00000547068 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 CEP112Q8N8E3 955 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 PNKPQ96T60 521 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 POLR3EQ9NVU0 708 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
NPAS3-205ENST00000547068 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 E2F4Q16254 413 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 DDB1Q16531 1140 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 STOX1Q6ZVD7 989 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 MSANTD4Q8NCY6 345 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 DESI2Q9BSY9 194 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
NPAS3-205ENST00000547068 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 CARMIL3Q8ND23 1372 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 PSEN1P49768 467 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 ADKP55263 362 aaKnown RBP12.25□□□□□ -0.45
NPAS3-205ENST00000547068 CASP8Q14790 479 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
NPAS3-205ENST00000547068 PLEKHA4Q9H4M7 779 aa12.25□□□□□ -0.45
NPAS3-205ENST00000547068 MYO1BO43795 1136 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 PPFIA4O75335 1185 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 CPP00450 1065 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 PHKG2P15735 406 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 TBX2Q13207 712 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms