RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 HPS5Q9UPZ3 1129 aa17.83■□□□□ 0.44
COL2A1-209ENST00000546974 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
COL2A1-209ENST00000546974 TNRC18O15417 2968 aaPredicted RBP17.82■□□□□ 0.44
COL2A1-209ENST00000546974 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL2A1-209ENST00000546974 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
COL2A1-209ENST00000546974 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
COL2A1-209ENST00000546974 CDC42EP5Q6NZY7 148 aa17.82■□□□□ 0.44
COL2A1-209ENST00000546974 PDS5AQ29RF7 1337 aaKnown RBP17.81■□□□□ 0.44
COL2A1-209ENST00000546974 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 GTF2A2P52657 109 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 TFCP2Q12800 502 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
COL2A1-209ENST00000546974 FBXO46Q6PJ61 603 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-209ENST00000546974 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 XAGE2Q96GT9 111 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 WRNIP1Q96S55 665 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 HTTP42858 3142 aa17.81■□□□□ 0.44
COL2A1-209ENST00000546974 SPDYE5A6NIY4 337 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 CRHR2Q13324 411 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
COL2A1-209ENST00000546974 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 ZNF341Q9BYN7 854 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 SNCAIPQ9Y6H5 919 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 CENPFP49454 3210 aa17.8■□□□□ 0.44
COL2A1-209ENST00000546974 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
COL2A1-209ENST00000546974 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
COL2A1-209ENST00000546974 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
COL2A1-209ENST00000546974 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
COL2A1-209ENST00000546974 CCL15-CCL14A0A0B4J2E2 113 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 SOX10P56693 466 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 TCP10Q12799 353 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 NFIAQ12857 509 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 G3BP1Q13283 466 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL2A1-209ENST00000546974 CCL15Q16663 113 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
COL2A1-209ENST00000546974 MIGA2Q7L4E1 593 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 SLF2Q8IX21 1173 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 FAM198AQ9UFP1 575 aa17.78■□□□□ 0.44
COL2A1-209ENST00000546974 GAKO14976 1311 aa17.77■□□□□ 0.44
COL2A1-209ENST00000546974 OTOP1Q7RTM1 612 aa17.77■□□□□ 0.44
COL2A1-209ENST00000546974 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
COL2A1-209ENST00000546974 ABCF2Q9UG63 623 aa17.77■□□□□ 0.44
COL2A1-209ENST00000546974 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
COL2A1-209ENST00000546974 TRIM17Q9Y577 477 aa17.77■□□□□ 0.44
COL2A1-209ENST00000546974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.77■□□□□ 0.44
COL2A1-209ENST00000546974 SP3Q02447 781 aa17.76■□□□□ 0.43
COL2A1-209ENST00000546974 PPATQ06203 517 aa17.76■□□□□ 0.43
COL2A1-209ENST00000546974 PPIL2Q13356 520 aa17.76■□□□□ 0.43
COL2A1-209ENST00000546974 DZIP1Q86YF9 867 aaKnown RBP17.76■□□□□ 0.43
COL2A1-209ENST00000546974 IDI2Q9BXS1 227 aa17.76■□□□□ 0.43
COL2A1-209ENST00000546974 ZFYVE28Q9HCC9 887 aa17.76■□□□□ 0.43
COL2A1-209ENST00000546974 ZCCHC17Q9NP64 241 aaKnown RBP17.76■□□□□ 0.43
COL2A1-209ENST00000546974 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 IRF6O14896 467 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 ENTPD3O75355 529 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 CETPP11597 493 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 INPP5BP32019 993 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 POLA2Q14181 598 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 TAF1CQ15572 869 aaPredicted RBP17.75■□□□□ 0.43
COL2A1-209ENST00000546974 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 CD99L2Q8TCZ2 262 aa17.75■□□□□ 0.43
COL2A1-209ENST00000546974 ARID4AP29374 1257 aaPredicted RBP17.74■□□□□ 0.43
COL2A1-209ENST00000546974 ATP8B2P98198 1209 aa17.74■□□□□ 0.43
COL2A1-209ENST00000546974 ZFPM1Q8IX07 1006 aa17.74■□□□□ 0.43
COL2A1-209ENST00000546974 FTSJ3Q8IY81 847 aaKnown RBP17.74■□□□□ 0.43
COL2A1-209ENST00000546974 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
COL2A1-209ENST00000546974 DOCK2Q92608 1830 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 WDHD1O75717 1129 aaPredicted RBP17.73■□□□□ 0.43
COL2A1-209ENST00000546974 RGS3P49796 1198 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 MECOMQ03112 1051 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
COL2A1-209ENST00000546974 SPATA5Q8NB90 893 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 GPR108Q9NPR9 543 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 PTPN22Q9Y2R2 807 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 RFX7Q2KHR2 1363 aa17.73■□□□□ 0.43
COL2A1-209ENST00000546974 MROH7-TTC4A0A0A0MT08 1334 aa17.72■□□□□ 0.43
COL2A1-209ENST00000546974 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
COL2A1-209ENST00000546974 GPR75-ASB3A0A0A6YYF3 556 aa17.72■□□□□ 0.43
COL2A1-209ENST00000546974 BTBD19C9JJ37 291 aa17.72■□□□□ 0.43
COL2A1-209ENST00000546974 BTDP43251 543 aa17.72■□□□□ 0.43
COL2A1-209ENST00000546974 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
COL2A1-209ENST00000546974 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
COL2A1-209ENST00000546974 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.43
COL2A1-209ENST00000546974 GSTO1P78417 241 aa17.71■□□□□ 0.43
COL2A1-209ENST00000546974 MAP3K10Q02779 954 aa17.71■□□□□ 0.43
COL2A1-209ENST00000546974 ARHGEF6Q15052 776 aa17.71■□□□□ 0.43
COL2A1-209ENST00000546974 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
COL2A1-209ENST00000546974 KCNH4Q9UQ05 1017 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms