RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FKBP1BP68106 108 aa17.58■□□□□ 0.4
DDX54-203ENST00000546869 FMR1Q06787 632 aaKnown RBP eCLIP17.58■□□□□ 0.49e-11■■■■■ 39.8
DDX54-203ENST00000546869 CERS3Q8IU89 383 aa17.58■□□□□ 0.4
DDX54-203ENST00000546869 PI4K2BQ8TCG2 481 aa17.58■□□□□ 0.4
DDX54-203ENST00000546869 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
DDX54-203ENST00000546869 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.4
DDX54-203ENST00000546869 VEZTQ9HBM0 779 aa17.58■□□□□ 0.4
DDX54-203ENST00000546869 USP40Q9NVE5 1235 aa17.58■□□□□ 0.4
DDX54-203ENST00000546869 CELF2O95319 508 aaKnown RBP17.57■□□□□ 0.4
DDX54-203ENST00000546869 BAG3O95817 575 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 NEFLP07196 543 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 BTDP43251 543 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 PDE1AP54750 535 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 RASA3Q14644 834 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 B4GALNT3Q6L9W6 998 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 OSBPL3Q9H4L5 887 aa17.57■□□□□ 0.4
DDX54-203ENST00000546869 ECM29Q5VYK3 1845 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 PLCG2P16885 1265 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 RHBDL3P58872 404 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 SUPT20HL1Q3ZLR7 823 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 DLK2Q6UY11 383 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 TICAM2Q86XR7 235 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 FAM151AQ8WW52 585 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 HHIPL1Q96JK4 782 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
DDX54-203ENST00000546869 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
DDX54-203ENST00000546869 TCP10L2B9ZVM9 353 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 ENTPD3O75355 529 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 CYP7A1P22680 504 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 NF2P35240 595 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 SLC9C2Q5TAH2 1124 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 MAGEB6Q8N7X4 407 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 NOL10Q9BSC4 688 aaKnown RBP17.55■□□□□ 0.4
DDX54-203ENST00000546869 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.4
DDX54-203ENST00000546869 TLL2Q9Y6L7 1015 aa17.55■□□□□ 0.4
DDX54-203ENST00000546869 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 RPAP1Q9BWH6 1393 aaPredicted RBP17.54■□□□□ 0.4
DDX54-203ENST00000546869 WDHD1O75717 1129 aaPredicted RBP17.54■□□□□ 0.4
DDX54-203ENST00000546869 PDE6AP16499 860 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 UBE3CQ15386 1083 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 ADGRA1Q86SQ6 560 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 PLEKHM2Q8IWE5 1019 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 C2orf69Q8N8R5 385 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
DDX54-203ENST00000546869 EDC3Q96F86 508 aaKnown RBP17.54■□□□□ 0.4
DDX54-203ENST00000546869 GBA2Q9HCG7 927 aaPredicted RBP17.54■□□□□ 0.4
DDX54-203ENST00000546869 SCAF8Q9UPN6 1271 aaKnown RBP17.54■□□□□ 0.4
DDX54-203ENST00000546869 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 TCRBV5S4A2TA0A5A2 114 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 UNCXA6NJT0 531 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 RASSF10A6NK89 507 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 ADD2P35612 726 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 CACNB3P54284 484 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 MAP3K11Q16584 847 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 TSHZ3Q63HK5 1081 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 HOOK2Q96ED9 719 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 FAM198AQ9UFP1 575 aa17.53■□□□□ 0.4
DDX54-203ENST00000546869 DOCK2Q92608 1830 aa17.52■□□□□ 0.4
DDX54-203ENST00000546869 NFIAQ12857 509 aa17.52■□□□□ 0.4
DDX54-203ENST00000546869 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
DDX54-203ENST00000546869 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.4
DDX54-203ENST00000546869 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.4
DDX54-203ENST00000546869 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
DDX54-203ENST00000546869 ZNF408Q9H9D4 720 aa17.52■□□□□ 0.4
DDX54-203ENST00000546869 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX54-203ENST00000546869 MAST2Q6P0Q8 1798 aa17.52■□□□□ 0.4
DDX54-203ENST00000546869 ZNF532Q9HCE3 1301 aa17.51■□□□□ 0.39
DDX54-203ENST00000546869 ZFYP08048 801 aaPredicted RBP17.51■□□□□ 0.39
DDX54-203ENST00000546869 NBPF12Q5TAG4 269 aaPredicted RBP17.51■□□□□ 0.39
DDX54-203ENST00000546869 DNAJC5GQ8N7S2 189 aa17.51■□□□□ 0.39
DDX54-203ENST00000546869 TRPM7Q96QT4 1865 aa17.51■□□□□ 0.39
DDX54-203ENST00000546869 RIOK1Q9BRS2 568 aaKnown RBP17.51■□□□□ 0.39
DDX54-203ENST00000546869 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
DDX54-203ENST00000546869 RGS3P49796 1198 aa17.5■□□□□ 0.39
DDX54-203ENST00000546869 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
DDX54-203ENST00000546869 SH3RF3Q8TEJ3 882 aaPredicted RBP17.5■□□□□ 0.39
DDX54-203ENST00000546869 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
DDX54-203ENST00000546869 MAP3K10Q02779 954 aa17.49■□□□□ 0.39
DDX54-203ENST00000546869 ARMC9Q7Z3E5 817 aa17.49■□□□□ 0.39
DDX54-203ENST00000546869 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
DDX54-203ENST00000546869 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
DDX54-203ENST00000546869 ABT1Q9ULW3 272 aaKnown RBP17.49■□□□□ 0.39
DDX54-203ENST00000546869 COL2A1P02458 1487 aaPredicted RBP17.49■□□□□ 0.39
DDX54-203ENST00000546869 MAGEB6P1A0A0J9YX57 407 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 RNF113AO15541 343 aaKnown RBP17.48■□□□□ 0.39
DDX54-203ENST00000546869 PDE4AP27815 886 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 HUNKP57058 714 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 DYNLL1P63167 89 aaKnown RBP17.48■□□□□ 0.39
DDX54-203ENST00000546869 HTRA3P83110 453 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 LDLRAD1Q5T700 205 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 MIGA1Q8NAN2 632 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 OSBPL5Q9H0X9 879 aaPredicted RBP17.48■□□□□ 0.39
DDX54-203ENST00000546869 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
DDX54-203ENST00000546869 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
DDX54-203ENST00000546869 USP2O75604 605 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms