RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CCL15-CCL14A0A0B4J2E2 113 aa23.24■■□□□ 1.31
CHERP-204ENST00000546538 CCL15Q16663 113 aa23.24■■□□□ 1.31
CHERP-204ENST00000546538 FAM198AQ9UFP1 575 aa23.24■■□□□ 1.31
CHERP-204ENST00000546538 TRIM27P14373 513 aa23.23■■□□□ 1.31
CHERP-204ENST00000546538 CCDC102BQ68D86 513 aa23.23■■□□□ 1.31
CHERP-204ENST00000546538 MIGA2Q7L4E1 593 aa23.23■■□□□ 1.31
CHERP-204ENST00000546538 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
CHERP-204ENST00000546538 TMOD2Q9NZR1 351 aa23.23■■□□□ 1.31
CHERP-204ENST00000546538 CSADQ9Y600 493 aa23.23■■□□□ 1.31
CHERP-204ENST00000546538 ZBTB22O15209 634 aa23.22■■□□□ 1.31
CHERP-204ENST00000546538 BCAR3O75815 825 aa23.22■■□□□ 1.31
CHERP-204ENST00000546538 TIMM10P62072 90 aa23.22■■□□□ 1.31
CHERP-204ENST00000546538 MTX1Q13505 466 aa23.22■■□□□ 1.31
CHERP-204ENST00000546538 ZSWIM8A7E2V4 1837 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 IRF6O14896 467 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 INPP5BP32019 993 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 GTF2A2P52657 109 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 TCP10Q12799 353 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 RASGRF1Q13972 1273 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 OTUD7BQ6GQQ9 843 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 FAM151AQ8WW52 585 aa23.21■■□□□ 1.31
CHERP-204ENST00000546538 LDHBP07195 334 aaKnown RBP23.2■■□□□ 1.3
CHERP-204ENST00000546538 ERO1BQ86YB8 467 aa23.2■■□□□ 1.3
CHERP-204ENST00000546538 DENND2AQ9ULE3 1009 aa23.2■■□□□ 1.3
CHERP-204ENST00000546538 PTPN22Q9Y2R2 807 aa23.2■■□□□ 1.3
CHERP-204ENST00000546538 RFX7Q2KHR2 1363 aa23.2■■□□□ 1.3
CHERP-204ENST00000546538 ATRNL1Q5VV63 1379 aa23.2■■□□□ 1.3
CHERP-204ENST00000546538 MYH2Q9UKX2 1941 aa23.2■■□□□ 1.3
CHERP-204ENST00000546538 SEMA3EO15041 775 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 SRGAP3O43295 1099 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 SP3Q02447 781 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 TFCP2Q12800 502 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 ERO1AQ96HE7 468 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 GNL3LQ9NVN8 582 aaKnown RBP23.19■■□□□ 1.3
CHERP-204ENST00000546538 ZNF112Q9UJU3 913 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 GAKO14976 1311 aa23.19■■□□□ 1.3
CHERP-204ENST00000546538 TAF1CQ15572 869 aaPredicted RBP23.18■■□□□ 1.3
CHERP-204ENST00000546538 ZNF384Q8TF68 577 aa23.18■■□□□ 1.3
CHERP-204ENST00000546538 A0A1B0GUL7 405 aa23.17■■□□□ 1.3
CHERP-204ENST00000546538 BTBD19C9JJ37 291 aa23.17■■□□□ 1.3
CHERP-204ENST00000546538 PPIL2Q13356 520 aa23.17■■□□□ 1.3
CHERP-204ENST00000546538 ZNF341Q9BYN7 854 aa23.17■■□□□ 1.3
CHERP-204ENST00000546538 USP40Q9NVE5 1235 aa23.17■■□□□ 1.3
CHERP-204ENST00000546538 KIAA0100Q14667 2235 aaKnown RBP23.17■■□□□ 1.3
CHERP-204ENST00000546538 PNMA6EA0A0J9YXQ4 647 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 GNAI3P08754 354 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 SLURP2P0DP57 97 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 ATF7IPQ6VMQ6 1270 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 SH3BP5LQ7L8J4 393 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 XAGE2Q96GT9 111 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 EFCC1Q9HA90 598 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 HDAC5Q9UQL6 1122 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 POTEFA5A3E0 1075 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 MOGSQ13724 837 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 DCAF15Q66K64 600 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 CLUAP1Q96AJ1 413 aa23.16■■□□□ 1.3
CHERP-204ENST00000546538 PDS5AQ29RF7 1337 aaKnown RBP23.15■■□□□ 1.3
CHERP-204ENST00000546538 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 DOCK2Q92608 1830 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 SLC34A2O95436 690 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 CETPP11597 493 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 PI16Q6UXB8 463 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 HOOK2Q96ED9 719 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 ZFYVE28Q9HCC9 887 aa23.15■■□□□ 1.3
CHERP-204ENST00000546538 PPATQ06203 517 aa23.14■■□□□ 1.29
CHERP-204ENST00000546538 SNAPC2Q13487 334 aa23.14■■□□□ 1.29
CHERP-204ENST00000546538 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.29
CHERP-204ENST00000546538 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.29
CHERP-204ENST00000546538 ARMC5Q96C12 935 aa23.14■■□□□ 1.29
CHERP-204ENST00000546538 ARHGAP39Q9C0H5 1083 aa23.14■■□□□ 1.29
CHERP-204ENST00000546538 RBBP6Q7Z6E9 1792 aaKnown RBP23.14■■□□□ 1.29
CHERP-204ENST00000546538 RGS3P49796 1198 aa23.13■■□□□ 1.29
CHERP-204ENST00000546538 IDI2Q9BXS1 227 aa23.13■■□□□ 1.29
CHERP-204ENST00000546538 DDX4Q9NQI0 724 aaKnown RBP23.13■■□□□ 1.29
CHERP-204ENST00000546538 KCNH4Q9UQ05 1017 aa23.13■■□□□ 1.29
CHERP-204ENST00000546538 PHF20L1A8MW92 1017 aa23.12■■□□□ 1.29
CHERP-204ENST00000546538 TLR2O60603 784 aa23.12■■□□□ 1.29
CHERP-204ENST00000546538 WDHD1O75717 1129 aaPredicted RBP23.12■■□□□ 1.29
CHERP-204ENST00000546538 NOL9Q5SY16 702 aaKnown RBP23.12■■□□□ 1.29
CHERP-204ENST00000546538 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
CHERP-204ENST00000546538 ABCF2Q9UG63 623 aa23.12■■□□□ 1.29
CHERP-204ENST00000546538 GNAI2P04899 355 aa23.11■■□□□ 1.29
CHERP-204ENST00000546538 CTGFP29279 349 aa23.11■■□□□ 1.29
CHERP-204ENST00000546538 FAM163AQ96GL9 167 aaPredicted RBP23.11■■□□□ 1.29
CHERP-204ENST00000546538 ZCCHC17Q9NP64 241 aaKnown RBP23.11■■□□□ 1.29
CHERP-204ENST00000546538 HMG20BQ9P0W2 317 aa23.11■■□□□ 1.29
CHERP-204ENST00000546538 ADGRA2Q96PE1 1338 aa23.11■■□□□ 1.29
CHERP-204ENST00000546538 DDTLA6NHG4 134 aaPredicted RBP23.1■■□□□ 1.29
CHERP-204ENST00000546538 IPO8O15397 1037 aaKnown RBP23.1■■□□□ 1.29
CHERP-204ENST00000546538 MECOMQ03112 1051 aa23.1■■□□□ 1.29
CHERP-204ENST00000546538 ZGPATQ8N5A5 531 aaKnown RBP23.1■■□□□ 1.29
CHERP-204ENST00000546538 AKAP2Q9Y2D5 859 aa23.1■■□□□ 1.29
CHERP-204ENST00000546538 PTCH2Q9Y6C5 1203 aa23.1■■□□□ 1.29
CHERP-204ENST00000546538 ENTPD3O75355 529 aa23.09■■□□□ 1.29
CHERP-204ENST00000546538 RHBDL3P58872 404 aa23.09■■□□□ 1.29
CHERP-204ENST00000546538 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
CHERP-204ENST00000546538 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
CHERP-204ENST00000546538 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
CHERP-204ENST00000546538 DZIP1Q86YF9 867 aaKnown RBP23.09■■□□□ 1.29
CHERP-204ENST00000546538 MROH7-TTC4A0A0A0MT08 1334 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms