RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 PTPN18Q99952 460 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 SIL1Q9H173 461 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 CHMP3Q9Y3E7 222 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
KDM1B-203ENST00000546309 FAM205AQ6ZU69 1335 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 MROH5Q6ZUA9 1318 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 KIAA0100Q14667 2235 aaKnown RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 HIP1O00291 1037 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 USP2O75604 605 aaPredicted RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 REC8O95072 547 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 CHMLP26374 656 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 TM4SF4P48230 202 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 PRKG1Q13976 671 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 FBXO33Q7Z6M2 555 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 CTU1Q7Z7A3 348 aaKnown RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 IL17RAQ96F46 866 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 IPO9Q96P70 1041 aaKnown RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 SNRKQ9NRH2 765 aa9.35□□□□□ -0.91
KDM1B-203ENST00000546309 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
KDM1B-203ENST00000546309 CLRN2A0PK11 232 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 SPDYE2BA6NHP3 402 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
KDM1B-203ENST00000546309 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
KDM1B-203ENST00000546309 PDE8BO95263 885 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 SPDYE6P0CI01 402 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 FGFR2P21802 821 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 IGHMBP2P38935 993 aaKnown RBP9.34□□□□□ -0.91
KDM1B-203ENST00000546309 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 TAF7LQ5H9L4 462 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 HAUS7Q99871 368 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 USP26Q9BXU7 913 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 CCDC8Q9H0W5 538 aaPredicted RBP9.34□□□□□ -0.91
KDM1B-203ENST00000546309 DEFB129Q9H1M3 183 aa9.34□□□□□ -0.91
KDM1B-203ENST00000546309 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
KDM1B-203ENST00000546309 A0A1B0GUL7 405 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 NF2P35240 595 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 CFAP100Q494V2 611 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 SPRYD7Q5W111 196 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 ZNF296Q8WUU4 475 aaPredicted RBP9.33□□□□□ -0.92
KDM1B-203ENST00000546309 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 ESYT1Q9BSJ8 1104 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 ANKRD2Q9GZV1 360 aa9.33□□□□□ -0.92
KDM1B-203ENST00000546309 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 CACNB3P54284 484 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 MFAP1P55081 439 aaKnown RBP9.32□□□□□ -0.92
KDM1B-203ENST00000546309 FKBP1BP68106 108 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
KDM1B-203ENST00000546309 PRPF38BQ5VTL8 546 aaKnown RBP9.32□□□□□ -0.92
KDM1B-203ENST00000546309 TSHZ3Q63HK5 1081 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.32□□□□□ -0.92
KDM1B-203ENST00000546309 RUFY2Q8WXA3 655 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 MPHOSPH8Q99549 860 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 DBNDD2Q9BQY9 259 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 TDRD3Q9H7E2 651 aaKnown RBP9.32□□□□□ -0.92
KDM1B-203ENST00000546309 CNNM1Q9NRU3 951 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 TLR7Q9NYK1 1049 aaKnown RBP9.32□□□□□ -0.92
KDM1B-203ENST00000546309 AK9Q5TCS8 1911 aa9.32□□□□□ -0.92
KDM1B-203ENST00000546309 RAD50Q92878 1312 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 SGSM2O43147 1006 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 BCAMP50895 628 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 TIMM10P62072 90 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 FKBP1AP62942 108 aaKnown RBP9.31□□□□□ -0.92
KDM1B-203ENST00000546309 PUM3Q15397 648 aaKnown RBP9.31□□□□□ -0.92
KDM1B-203ENST00000546309 SPDYE2Q495Y8 402 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 METTL24Q5JXM2 366 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 CCDC158Q5M9N0 1113 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 APOBEC3HQ6NTF7 200 aaKnown RBP9.31□□□□□ -0.92
KDM1B-203ENST00000546309 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 ZNF384Q8TF68 577 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 LPIN2Q92539 896 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 ZNF70Q9UC06 446 aaPredicted RBP9.31□□□□□ -0.92
KDM1B-203ENST00000546309 HPS5Q9UPZ3 1129 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 MYO3BQ8WXR4 1341 aa9.31□□□□□ -0.92
KDM1B-203ENST00000546309 IGSF3O75054 1194 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 ANAPC15P60006 121 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 SREBF2Q12772 1141 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 UBE4AQ14139 1066 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 RASA3Q14644 834 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 ATP2B3Q16720 1220 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 KBTBD3Q8NAB2 608 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 SNX21Q969T3 373 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 NEUROD6Q96NK8 337 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 KIF2CQ99661 725 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 TMEM39BQ9GZU3 492 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 BOLA2Q9H3K6 86 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
KDM1B-203ENST00000546309 ANGEL1Q9UNK9 670 aaKnown RBP9.3□□□□□ -0.92
KDM1B-203ENST00000546309 MYH13Q9UKX3 1938 aa9.3□□□□□ -0.92
KDM1B-203ENST00000546309 MYO5AQ9Y4I1 1855 aaKnown RBP9.3□□□□□ -0.92
KDM1B-203ENST00000546309 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
KDM1B-203ENST00000546309 GPR25O00155 361 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms