RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 NPHP1O15259 732 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 IPO8O15397 1037 aaKnown RBP8□□□□□ -1.13
PRKDC-211ENST00000546304 NTSR2O95665 410 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 SERPINB2P05120 415 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 IGKV5-2P06315 115 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 TM4SF1P30408 202 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
PRKDC-211ENST00000546304 ZKSCAN2Q63HK3 967 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 PRR5LQ6MZQ0 368 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 SLC4A10Q6U841 1118 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 FTSJ3Q8IY81 847 aaKnown RBP8□□□□□ -1.13
PRKDC-211ENST00000546304 LINS1Q8NG48 757 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 ARHGAP45Q92619 1136 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 NYXQ9GZU5 481 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 CWC25Q9NXE8 425 aaPredicted RBP8□□□□□ -1.13
PRKDC-211ENST00000546304 SH3TC1Q8TE82 1336 aa8□□□□□ -1.13
PRKDC-211ENST00000546304 ARFGEF1Q9Y6D6 1849 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 FAM177BA6PVY3 158 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 ERVH48-1M5A8F1 160 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 ST5P78524 1137 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 TRIM28Q13263 835 aaKnown RBP7.99□□□□□ -1.13
PRKDC-211ENST00000546304 MCM6Q14566 821 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 BEND3Q5T5X7 828 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
PRKDC-211ENST00000546304 SUSD4Q5VX71 490 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 TREML4Q6UXN2 200 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 PPP1R42Q7Z4L9 355 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 CCDC191Q8NCU4 936 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 UTP14AQ9BVJ6 771 aaKnown RBP7.99□□□□□ -1.13
PRKDC-211ENST00000546304 SRCIN1Q9C0H9 1055 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 PPP1R1BQ9UD71 204 aaPredicted RBP7.99□□□□□ -1.13
PRKDC-211ENST00000546304 TNNQ9UQP3 1299 aa7.99□□□□□ -1.13
PRKDC-211ENST00000546304 TAF1P21675 1872 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 LRRC37AA6NMS7 1700 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 A0A1B0GUL6 1792 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 ALDH1L1O75891 902 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 BMP2P12643 396 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 CCT4P50991 539 aaKnown RBP7.98□□□□□ -1.13
PRKDC-211ENST00000546304 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
PRKDC-211ENST00000546304 CBLBQ13191 982 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 GCKRQ14397 625 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-211ENST00000546304 CLUAP1Q96AJ1 413 aa7.98□□□□□ -1.13
PRKDC-211ENST00000546304 TRMT112Q9UI30 125 aaKnown RBP7.98□□□□□ -1.13
PRKDC-211ENST00000546304 GRM8O00222 908 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 LILRA1O75019 489 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 PCCAP05165 728 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-211ENST00000546304 RLBP1P12271 317 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 GTF2E1P29083 439 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-211ENST00000546304 IRF5Q13568 498 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 C6orf118Q5T5N4 469 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 TPTE2Q6XPS3 522 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 UBE3BQ7Z3V4 1068 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 DZIP1LQ8IYY4 767 aaKnown RBP7.97□□□□□ -1.13
PRKDC-211ENST00000546304 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-211ENST00000546304 ZNF784Q8NCA9 323 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-211ENST00000546304 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 CDHR2Q9BYE9 1310 aa7.97□□□□□ -1.13
PRKDC-211ENST00000546304 COL4A1P02462 1669 aa7.96□□□□□ -1.13
PRKDC-211ENST00000546304 TERTO14746 1132 aaKnown RBP7.96□□□□□ -1.14
PRKDC-211ENST00000546304 PLIN1O60240 522 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 RAB15P59190 212 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
PRKDC-211ENST00000546304 TMEM132AQ24JP5 1023 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 RNF20Q5VTR2 975 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
PRKDC-211ENST00000546304 ITPRIPQ8IWB1 547 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 TMEM57Q8N5G2 664 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 FAM89AQ96GI7 184 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 BRIP1Q9BX63 1249 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-211ENST00000546304 CD2APQ9Y5K6 639 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 SLX4Q8IY92 1834 aa7.96□□□□□ -1.14
PRKDC-211ENST00000546304 IRS4O14654 1257 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-211ENST00000546304 SPINT1O43278 529 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 HCLS1P14317 486 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-211ENST00000546304 HSP90B1P14625 803 aaKnown RBP7.95□□□□□ -1.14
PRKDC-211ENST00000546304 PDE6BP35913 854 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 CASP7P55210 303 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 CRY2Q49AN0 593 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 NPAS3Q8IXF0 933 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 SYNE4Q8N205 404 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 NLGN2Q8NFZ4 835 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 PANK1Q8TE04 598 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 C9orf78Q9NZ63 289 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-211ENST00000546304 UTYO14607 1347 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 LTBP1Q14766 1721 aa7.95□□□□□ -1.14
PRKDC-211ENST00000546304 H7C1W4 665 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 WFS1O76024 890 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-211ENST00000546304 NBPF7P0C2Y1 421 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-211ENST00000546304 UBTFL1P0CB47 393 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-211ENST00000546304 CTSWP56202 376 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 MVPQ14764 893 aaKnown RBP7.94□□□□□ -1.14
PRKDC-211ENST00000546304 C20orf194Q5TEA3 1177 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 JARID2Q92833 1246 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-211ENST00000546304 MEIS3Q99687 375 aa7.94□□□□□ -1.14
PRKDC-211ENST00000546304 PLA2G12BQ9BX93 195 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms