RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 MRVI1Q9Y6F6 885 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 SYNRGQ9UMZ2 1314 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 MTX1Q13505 466 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 PLBD2Q8NHP8 589 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 EXOC5O00471 708 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 ZEB2O60315 1214 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 GCP02774 474 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 NF2P35240 595 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 DNAJC21Q5F1R6 531 aaKnown RBP13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 KRT40Q6A162 431 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 DTHD1Q6ZMT9 781 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 DIS3L2Q8IYB7 885 aaKnown RBP13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 ERCC6LQ2NKX8 1250 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 CCDC121Q6ZUS5 278 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 TMTC1Q8IUR5 882 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 NEK11Q8NG66 645 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 VPS16Q9H269 839 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 NDUFB9Q9Y6M9 179 aa13.8□□□□□ -0.2
NPC1L1-204ENST00000546276 MACROD2A1Z1Q3 448 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 NUTM2BA6NNL0 878 aaPredicted RBP13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 NUTM2EB1AL46 878 aaPredicted RBP13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 NAPAP54920 295 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 GCKRQ14397 625 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 TBCAO75347 108 aaKnown RBP13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 MBD4O95243 580 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 ZNF174Q15697 407 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 BCORL1Q5H9F3 1711 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 E7EWF7 191 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 GPAA1O43292 621 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 ZKSCAN3Q9BRR0 538 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 NSRP1Q9H0G5 558 aaKnown RBP13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 MYOM2P54296 1465 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 POSTNQ15063 836 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 KIAA1524Q8TCG1 905 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 IFT81Q8WYA0 676 aa13.79□□□□□ -0.2
NPC1L1-204ENST00000546276 PFKFB2O60825 505 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 LMBR1Q8WVP7 490 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 ETF1P62495 437 aaKnown RBP13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 GSTO1P78417 241 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 C6orf50Q9HD87 102 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 DMTNQ08495 405 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 EAF2Q96CJ1 260 aaPredicted RBP13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 IRS4O14654 1257 aaPredicted RBP13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 ARID5AQ03989 594 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 XAGE2Q96GT9 111 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 RASAL2Q9UJF2 1139 aa13.78□□□□□ -0.2
NPC1L1-204ENST00000546276 DESP17661 470 aa13.77□□□□□ -0.2
NPC1L1-204ENST00000546276 CDC25BP30305 580 aa13.77□□□□□ -0.2
NPC1L1-204ENST00000546276 TNNC1P63316 161 aa13.77□□□□□ -0.2
NPC1L1-204ENST00000546276 TBC1D5Q92609 795 aa13.77□□□□□ -0.2
NPC1L1-204ENST00000546276 EDC3Q96F86 508 aaKnown RBP13.77□□□□□ -0.2
NPC1L1-204ENST00000546276 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.2
NPC1L1-204ENST00000546276 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
NPC1L1-204ENST00000546276 PFKFB1P16118 471 aa13.77□□□□□ -0.21
NPC1L1-204ENST00000546276 TBC1D8BQ0IIM8 1120 aa13.77□□□□□ -0.21
NPC1L1-204ENST00000546276 UBE4AQ14139 1066 aa13.77□□□□□ -0.21
NPC1L1-204ENST00000546276 PPP1R2P41236 205 aa13.77□□□□□ -0.21
NPC1L1-204ENST00000546276 KRT79Q5XKE5 535 aa13.77□□□□□ -0.21
NPC1L1-204ENST00000546276 PRPHP41219 470 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 MSL1Q68DK7 614 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 HOOK3Q86VS8 718 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 BRD3Q15059 726 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 BEND3Q5T5X7 828 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 SYCP3Q8IZU3 236 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 ANKS4BQ8N8V4 417 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 AATKQ6ZMQ8 1374 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PAK1Q13153 545 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PNOCQ13519 176 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 MAP4K1Q92918 833 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PHKBQ93100 1093 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PLVAPQ9BX97 442 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 NSFL1CQ9UNZ2 370 aaKnown RBP13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PLIN2Q99541 437 aa13.76□□□□□ -0.21
NPC1L1-204ENST00000546276 PLEKHG3A1L390 1219 aa13.75□□□□□ -0.21
NPC1L1-204ENST00000546276 EFCAB8A8MWE9 144 aa13.75□□□□□ -0.21
NPC1L1-204ENST00000546276 KRT9P35527 623 aa13.75□□□□□ -0.21
NPC1L1-204ENST00000546276 UTP14CQ5TAP6 766 aaKnown RBP13.75□□□□□ -0.21
NPC1L1-204ENST00000546276 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms