RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PPIL2Q13356 520 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 TAF1CQ15572 869 aaPredicted RBP15.75■□□□□ 0.11
COPS7A-221ENST00000546229 DIXDC1Q155Q3 683 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 ARHGAP39Q9C0H5 1083 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 PCDH10Q9P2E7 1040 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 CSADQ9Y600 493 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 SALL1Q9NSC2 1324 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 CIAO1O76071 339 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 IFIT1P09914 478 aaKnown RBP15.74■□□□□ 0.11
COPS7A-221ENST00000546229 CTGFP29279 349 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 INPP5BP32019 993 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 MYH2Q9UKX2 1941 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 SZT2Q5T011 3432 aa15.74■□□□□ 0.11
COPS7A-221ENST00000546229 TLR2O60603 784 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 SLC5A1P13866 664 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 EN2P19622 333 aaPredicted RBP15.73■□□□□ 0.11
COPS7A-221ENST00000546229 CDC42EP5Q6NZY7 148 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 WDR66Q8TBY9 1149 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 FAM151AQ8WW52 585 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 ZFYVE28Q9HCC9 887 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 KCNH4Q9UQ05 1017 aa15.73■□□□□ 0.11
COPS7A-221ENST00000546229 GAKO14976 1311 aa15.72■□□□□ 0.11
COPS7A-221ENST00000546229 DOCK1Q14185 1865 aa15.72■□□□□ 0.11
COPS7A-221ENST00000546229 CETPP11597 493 aa15.72■□□□□ 0.11
COPS7A-221ENST00000546229 LACTBP83111 547 aaPredicted RBP15.72■□□□□ 0.11
COPS7A-221ENST00000546229 NOL9Q5SY16 702 aaKnown RBP15.72■□□□□ 0.11
COPS7A-221ENST00000546229 FRAT2O75474 233 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-221ENST00000546229 PHKA1P46020 1223 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 PPATQ06203 517 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 SNAPC2Q13487 334 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 ATP2B3Q16720 1220 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 C17orf99Q6UX52 265 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 ZFPM1Q8IX07 1006 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 ZNF341Q9BYN7 854 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 SMC4Q9NTJ3 1288 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
COPS7A-221ENST00000546229 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
COPS7A-221ENST00000546229 MGAMO43451 1857 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 ADORA1P30542 326 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 MIGA2Q7L4E1 593 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 SH3BP5LQ7L8J4 393 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 ZNF384Q8TF68 577 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 MEIS3Q99687 375 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 SIL1Q9H173 461 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 COPRSQ9NQ92 184 aa15.7■□□□□ 0.1
COPS7A-221ENST00000546229 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
COPS7A-221ENST00000546229 PDS5AQ29RF7 1337 aaKnown RBP15.69■□□□□ 0.1
COPS7A-221ENST00000546229 SIPA1L1O43166 1804 aa15.69■□□□□ 0.1
COPS7A-221ENST00000546229 PHF20L1A8MW92 1017 aa15.69■□□□□ 0.1
COPS7A-221ENST00000546229 ANKRD23Q86SG2 305 aa15.69■□□□□ 0.1
COPS7A-221ENST00000546229 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
COPS7A-221ENST00000546229 SHISA4Q96DD7 197 aa15.69■□□□□ 0.1
COPS7A-221ENST00000546229 HOOK2Q96ED9 719 aa15.69■□□□□ 0.1
COPS7A-221ENST00000546229 LRRFIP2Q9Y608 721 aaKnown RBP15.69■□□□□ 0.1
COPS7A-221ENST00000546229 CEP290O15078 2479 aa15.69■□□□□ 0.1
COPS7A-221ENST00000546229 LOC285556D6RIA3 1793 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 SEMA3EO15041 775 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 CT47B1P0C2W7 299 aaPredicted RBP15.68■□□□□ 0.1
COPS7A-221ENST00000546229 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
COPS7A-221ENST00000546229 MAP3K10Q02779 954 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 TCP10Q12799 353 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 RASGRF1Q13972 1273 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 SLC9C1Q4G0N8 1177 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 GPAT2Q6NUI2 795 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 IDI2Q9BXS1 227 aa15.68■□□□□ 0.1
COPS7A-221ENST00000546229 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
COPS7A-221ENST00000546229 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
COPS7A-221ENST00000546229 SLURP2P0DP57 97 aa15.67■□□□□ 0.1
COPS7A-221ENST00000546229 IL15P40933 162 aaPredicted RBP15.67■□□□□ 0.1
COPS7A-221ENST00000546229 MTX1Q13505 466 aa15.67■□□□□ 0.1
COPS7A-221ENST00000546229 HABP4Q5JVS0 413 aaKnown RBP15.67■□□□□ 0.1
COPS7A-221ENST00000546229 CCDC102BQ68D86 513 aa15.67■□□□□ 0.1
COPS7A-221ENST00000546229 SH3TC2Q8TF17 1288 aa15.67■□□□□ 0.1
COPS7A-221ENST00000546229 MAST2Q6P0Q8 1798 aa15.67■□□□□ 0.1
COPS7A-221ENST00000546229 AK9Q5TCS8 1911 aa15.66■□□□□ 0.1
COPS7A-221ENST00000546229 LDHBP07195 334 aaKnown RBP15.66■□□□□ 0.1
COPS7A-221ENST00000546229 BCRP11274 1271 aa15.66■□□□□ 0.1
COPS7A-221ENST00000546229 DDX4Q9NQI0 724 aaKnown RBP15.66■□□□□ 0.1
COPS7A-221ENST00000546229 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
COPS7A-221ENST00000546229 DENND2AQ9ULE3 1009 aa15.66■□□□□ 0.1
COPS7A-221ENST00000546229 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-221ENST00000546229 PDHXO00330 501 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 GNRH1P01148 92 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 RGS3P49796 1198 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 RARSP54136 660 aaKnown RBP15.65■□□□□ 0.1
COPS7A-221ENST00000546229 UBE2Q1Q7Z7E8 422 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-221ENST00000546229 USP40Q9NVE5 1235 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 CPA4Q9UI42 421 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 ATAD5Q96QE3 1844 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 LAMA3Q16787 3333 aa15.65■□□□□ 0.1
COPS7A-221ENST00000546229 A0A0G2JLL6 359 aaPredicted RBP15.64■□□□□ 0.09
COPS7A-221ENST00000546229 ENTPD3O75355 529 aa15.64■□□□□ 0.09
COPS7A-221ENST00000546229 OSBPP22059 807 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms