RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	THSD7A	Q9UPZ6	1657 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	MYL6B	P14649	208 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	GPT	P24298	496 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	LIG3	P49916	1009 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	MYD88	Q99836	296 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	TRMT1	Q9NXH9	659 aa	Known RBP	11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	ARFGEF2	Q9Y6D5	1785 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191		A0A0G2JS52	829 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	CABP4	P57796	275 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	CCDC93	Q567U6	631 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	RASEF	Q8IZ41	740 aa		11.29	□□□□□ -0.6
NEK6-215	ENST00000546191	TCHH	Q07283	1943 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	RTN2	O75298	545 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	RPS6KA3	P51812	740 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	CCDC144B	Q3MJ40	725 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	RINL	Q6ZS11	566 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	CCDC144CP	Q8IYA2	1237 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	BAG1	Q99933	345 aa	Predicted RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	ZNF232	Q9UNY5	417 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	LIMCH1	Q9UPQ0	1083 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	UBR2	Q8IWV8	1755 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	RFX5	P48382	616 aa	Predicted RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	EIF5	P55010	431 aa	Known RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	SNX1	Q13596	522 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	CRYM	Q14894	314 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	ARMC2	Q8NEN0	867 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	PLBD2	Q8NHP8	589 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	DDX54	Q8TDD1	881 aa	Known RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	UBXN4	Q92575	508 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	VPS18	Q9P253	973 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	PCDH11X	Q9BZA7	1347 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	PCDH11Y	Q9BZA8	1340 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	WDR33	Q9C0J8	1336 aa	Known RBP	11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	RFX7	Q2KHR2	1363 aa		11.28	□□□□□ -0.6
NEK6-215	ENST00000546191	ERVV-2	B6SEH9	535 aa		11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	NECTIN1	Q15223	517 aa		11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	NKX1-1	Q15270	411 aa	Predicted RBP	11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	EPHA10	Q5JZY3	1008 aa		11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	VPS53	Q5VIR6	699 aa		11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	TSHZ1	Q6ZSZ6	1077 aa		11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	MICAL1	Q8TDZ2	1067 aa		11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	CCDC97	Q96F63	343 aa	Predicted RBP	11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	AFDN	P55196	1824 aa	Known RBP	11.27	□□□□□ -0.6
NEK6-215	ENST00000546191	NF2	P35240	595 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	AK2	P54819	239 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	CASP7	P55210	303 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	PTH1R	Q03431	593 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	ZNF772	Q68DY9	489 aa	Predicted RBP	11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	PARD3B	Q8TEW8	1205 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	ZSWIM6	Q9HCJ5	1215 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	SMC3	Q9UQE7	1217 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	PAPPA	Q13219	1627 aa		11.27	□□□□□ -0.61
NEK6-215	ENST00000546191	TOGARAM1	Q9Y4F4	1720 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	ABCD1	P33897	745 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	NFXL1	Q6ZNB6	911 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	RUFY3	Q7L099	469 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	SEPT12	Q8IYM1	358 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	MAP4K1	Q92918	833 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	ANAPC4	Q9UJX5	808 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	POLD1	P28340	1107 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	ZNF75D	P51815	510 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	PTPN12	Q05209	780 aa	Known RBP	11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	ARID5B	Q14865	1188 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	BARGIN	Q6ZT62	677 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	PTF1A	Q7RTS3	328 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	MARCH10	Q8NA82	808 aa	Predicted RBP	11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	ZCRB1	Q8TBF4	217 aa	Known RBP	11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	FUT8	Q9BYC5	575 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	MED23	Q9ULK4	1368 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	KAT6B	Q8WYB5	2073 aa		11.26	□□□□□ -0.61
NEK6-215	ENST00000546191	SNUPN	O95149	360 aa	Known RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	SKIL	P12757	684 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	ATP5J	P18859	108 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	SLC5A9	Q2M3M2	681 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	LUZP1	Q86V48	1076 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	PLA2G4D	Q86XP0	818 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	LRRC8A	Q8IWT6	810 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	TRIM5	Q9C035	493 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	EPC1	Q9H2F5	836 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	TLR7	Q9NYK1	1049 aa	Known RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	CLIP2	Q9UDT6	1046 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	AKAP2	Q9Y2D5	859 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	TNS2	Q63HR2	1409 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	KCP	Q6ZWJ8	1503 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	PPFIA2	O75334	1257 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	ZKSCAN1	P17029	563 aa	Predicted RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	DHX8	Q14562	1220 aa	Known RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	NOL8	Q76FK4	1167 aa	Known RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	CCAR2	Q8N163	923 aa	Known RBP	11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	TMEM87A	Q8NBN3	555 aa		11.25	□□□□□ -0.61
NEK6-215	ENST00000546191	KIF9	Q9HAQ2	790 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms