RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 HAUS7Q99871 368 aa12.13□□□□□ -0.47
MDH1-216ENST00000544381 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
MDH1-216ENST00000544381 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.13□□□□□ -0.47
MDH1-216ENST00000544381 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
MDH1-216ENST00000544381 LTBP1Q14766 1721 aa12.13□□□□□ -0.47
MDH1-216ENST00000544381 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
MDH1-216ENST00000544381 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
MDH1-216ENST00000544381 SRGNP10124 158 aa12.12□□□□□ -0.47
MDH1-216ENST00000544381 SLC5A1P13866 664 aa12.12□□□□□ -0.47
MDH1-216ENST00000544381 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
MDH1-216ENST00000544381 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
MDH1-216ENST00000544381 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
MDH1-216ENST00000544381 ZNF622Q969S3 477 aaKnown RBP eCLIP12.12□□□□□ -0.47
MDH1-216ENST00000544381 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
MDH1-216ENST00000544381 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
MDH1-216ENST00000544381 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
MDH1-216ENST00000544381 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 ADORA1P30542 326 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 DDX46Q7L014 1031 aaKnown RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 HELBQ8NG08 1087 aaPredicted RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
MDH1-216ENST00000544381 LPIN2Q92539 896 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 MCCP23508 829 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 RPS8P62241 208 aaKnown RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 CHRNDQ07001 517 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 BECN1Q14457 450 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 OLFM4Q6UX06 510 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 TAF1DQ9H5J8 278 aaPredicted RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
MDH1-216ENST00000544381 BSDC1Q9NW68 430 aaPredicted RBP12.11□□□□□ -0.47
MDH1-216ENST00000544381 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
MDH1-216ENST00000544381 TAF5LO75529 589 aa12.1□□□□□ -0.47
MDH1-216ENST00000544381 PDE6BP35913 854 aa12.1□□□□□ -0.47
MDH1-216ENST00000544381 VEGFBP49765 207 aa12.1□□□□□ -0.47
MDH1-216ENST00000544381 STYK1Q6J9G0 422 aa12.1□□□□□ -0.47
MDH1-216ENST00000544381 RPGRQ92834 1020 aaKnown RBP12.1□□□□□ -0.47
MDH1-216ENST00000544381 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
MDH1-216ENST00000544381 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
MDH1-216ENST00000544381 GOLIM4O00461 696 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 SGSM2O43147 1006 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 EPB41L2O43491 1005 aaKnown RBP12.09□□□□□ -0.47
MDH1-216ENST00000544381 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 FGFR2P21802 821 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
MDH1-216ENST00000544381 PTGDRQ13258 359 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
MDH1-216ENST00000544381 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 TICAM2Q86XR7 235 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
MDH1-216ENST00000544381 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
MDH1-216ENST00000544381 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 TAF1P21675 1872 aa12.09□□□□□ -0.47
MDH1-216ENST00000544381 RFX7Q2KHR2 1363 aa12.08□□□□□ -0.48
MDH1-216ENST00000544381 KLRG2A4D1S0 409 aaPredicted RBP12.08□□□□□ -0.48
MDH1-216ENST00000544381 NMIQ13287 307 aaPredicted RBP12.08□□□□□ -0.48
MDH1-216ENST00000544381 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
MDH1-216ENST00000544381 RBM17Q96I25 401 aaKnown RBP12.08□□□□□ -0.48
MDH1-216ENST00000544381 ZNF512BQ96KM6 892 aaPredicted RBP12.08□□□□□ -0.48
MDH1-216ENST00000544381 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.48
MDH1-216ENST00000544381 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
MDH1-216ENST00000544381 MINPP1Q9UNW1 487 aa12.08□□□□□ -0.48
MDH1-216ENST00000544381 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
MDH1-216ENST00000544381 RAD50Q92878 1312 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 ARAP2Q8WZ64 1704 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 KCNJ4P48050 445 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 GRAPQ13588 217 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 UBE4AQ14139 1066 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
MDH1-216ENST00000544381 CNKSR1Q969H4 720 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 TRPM7Q96QT4 1865 aa12.07□□□□□ -0.48
MDH1-216ENST00000544381 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
MDH1-216ENST00000544381 HSPA8P11142 646 aaKnown RBP12.06□□□□□ -0.48
MDH1-216ENST00000544381 ARID4AP29374 1257 aaPredicted RBP12.06□□□□□ -0.48
MDH1-216ENST00000544381 PHKA1P46020 1223 aa12.06□□□□□ -0.48
MDH1-216ENST00000544381 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
MDH1-216ENST00000544381 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
MDH1-216ENST00000544381 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
MDH1-216ENST00000544381 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
MDH1-216ENST00000544381 COL4A1P02462 1669 aa12.05□□□□□ -0.48
MDH1-216ENST00000544381 A0A0D9SFI3 127 aa12.05□□□□□ -0.48
MDH1-216ENST00000544381 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
MDH1-216ENST00000544381 TMEM88BA6NKF7 163 aa12.05□□□□□ -0.48
MDH1-216ENST00000544381 SNAP23O00161 211 aa12.05□□□□□ -0.48
MDH1-216ENST00000544381 MCAMP43121 646 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms