RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 LLGL2Q6P1M3 1020 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 C20orf204Q6ZNR8 217 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 PDZD3Q86UT5 571 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 SLITRK4Q8IW52 837 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 GAL3ST3Q96A11 431 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 ANAPC16Q96DE5 110 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 DCAF5Q96JK2 942 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 SAMM50Q9Y512 469 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 FAM177BA6PVY3 158 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 H3BRJ5 948 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 LINC01387J3KSC0 135 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 MSTNO14793 375 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 CDK8P49336 464 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 AFF1P51825 1210 aaKnown RBP5.61□□□□□ -1.51
SCFD1-207ENST00000544052 CABP4P57796 275 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 GSTM4Q03013 218 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 PLA2G4EQ3MJ16 856 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 CPLX3Q8WVH0 158 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 TTC9Q92623 222 aa5.61□□□□□ -1.51
SCFD1-207ENST00000544052 CILPO75339 1184 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 EPXP11678 715 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 BMS1Q14692 1282 aaKnown RBP5.6□□□□□ -1.51
SCFD1-207ENST00000544052 OSBPL2Q9H1P3 480 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 BRMS1Q9HCU9 246 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 PPME1Q9Y570 386 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 M0R082 166 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 OIP5O43482 229 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 FBXW10Q5XX13 1052 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 SLCO4C1Q6ZQN7 724 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 GK5Q6ZS86 529 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 ANKS3Q6ZW76 656 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 REC114Q7Z4M0 266 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 CCDC84Q86UT8 332 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-207ENST00000544052 CKAP2LQ8IYA6 745 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 GOLGA6L1Q8N7Z2 621 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 FAM169BQ8N8A8 192 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 ZNF417Q8TAU3 575 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 KCNB2Q92953 911 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 SHDQ96IW2 340 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 ZNF587Q96SQ5 575 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-207ENST00000544052 CARD10Q9BWT7 1032 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 SRRTQ9BXP5 876 aaKnown RBP5.6□□□□□ -1.51
SCFD1-207ENST00000544052 LRRC3Q9BY71 257 aa5.6□□□□□ -1.51
SCFD1-207ENST00000544052 GRIN3BO60391 1043 aa5.59□□□□□ -1.51
SCFD1-207ENST00000544052 GSTP1P09211 210 aaKnown RBP5.59□□□□□ -1.51
SCFD1-207ENST00000544052 COL9A2Q14055 689 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-207ENST00000544052 MPP2Q14168 576 aa5.59□□□□□ -1.51
SCFD1-207ENST00000544052 LRRC14Q15048 493 aa5.59□□□□□ -1.51
SCFD1-207ENST00000544052 CWF19L2Q2TBE0 894 aaKnown RBP5.59□□□□□ -1.51
SCFD1-207ENST00000544052 HNRNPLLQ8WVV9 542 aaKnown RBP5.59□□□□□ -1.51
SCFD1-207ENST00000544052 GDF2Q9UK05 429 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-207ENST00000544052 ROBO2Q9HCK4 1378 aa5.59□□□□□ -1.51
SCFD1-207ENST00000544052 SELPP16109 830 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 CLCQ05315 142 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 SOGA3Q5TF21 947 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 NOP9Q86U38 636 aaKnown RBP5.59□□□□□ -1.52
SCFD1-207ENST00000544052 GALNT6Q8NCL4 622 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 SPOCK3Q9BQ16 436 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 EMILIN2Q9BXX0 1053 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 NRSN2Q9GZP1 204 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 STRIP2Q9ULQ0 834 aa5.59□□□□□ -1.52
SCFD1-207ENST00000544052 KLF4O43474 513 aa5.58□□□□□ -1.52
SCFD1-207ENST00000544052 LILRB5O75023 590 aa5.58□□□□□ -1.52
SCFD1-207ENST00000544052 BPNT1O95861 308 aa5.58□□□□□ -1.52
SCFD1-207ENST00000544052 CTSBP07858 339 aa5.58□□□□□ -1.52
SCFD1-207ENST00000544052 FERD3LQ96RJ6 166 aa5.58□□□□□ -1.52
SCFD1-207ENST00000544052 CDK11AQ9UQ88 783 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-207ENST00000544052 CADPSQ9ULU8 1353 aa5.58□□□□□ -1.52
SCFD1-207ENST00000544052 FSCN2O14926 492 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 MAOBP27338 520 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 RPL6Q02878 288 aaKnown RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 C19orf57Q0VDD7 668 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 AP3B2Q13367 1082 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 SERINC3Q13530 473 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 DDX54Q8TDD1 881 aaKnown RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 GPBAR1Q8TDU6 330 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 EDARADDQ8WWZ3 215 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 WDR89Q96FK6 387 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 KLHDC7BQ96G42 594 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 POLR3KQ9Y2Y1 108 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 K7ELQ4 463 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 SMAD7O15105 426 aaKnown RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 PIP4K2BP78356 416 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 INPP5AQ14642 412 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 MSL1Q68DK7 614 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 CHSY3Q70JA7 882 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 CCDC86Q9H6F5 360 aaKnown RBP5.57□□□□□ -1.52
SCFD1-207ENST00000544052 PCDHA4Q9UN74 947 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 PCDHB14Q9Y5E9 798 aa5.57□□□□□ -1.52
SCFD1-207ENST00000544052 CCDC85CA6NKD9 419 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 SHISA8B8ZZ34 492 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 TM4SF5O14894 197 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 TRIM37O94972 964 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 ITGB2P05107 769 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 ZNF165P49910 485 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 EIF6P56537 245 aaKnown RBP5.56□□□□□ -1.52
SCFD1-207ENST00000544052 NLRP12P59046 1061 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 RAB33AQ14088 237 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 CACTIN-AS1Q8N1I8 211 aa5.56□□□□□ -1.52
SCFD1-207ENST00000544052 GALNT11Q8NCW6 608 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms