RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GRM8O00222 908 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 NCBP1Q09161 790 aaKnown RBP17.3■□□□□ 0.36
CHD4-210ENST00000544040 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 ADGRF5Q8IZF2 1346 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 CHMP2AO43633 222 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
CHD4-210ENST00000544040 IQUBQ8NA54 791 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 EPB41P11171 864 aaKnown RBP17.3■□□□□ 0.36
CHD4-210ENST00000544040 SV2BQ7L1I2 683 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 CLSTN2Q9H4D0 955 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 CCDC141Q6ZP82 1450 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
CHD4-210ENST00000544040 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 TBC1D8BQ0IIM8 1120 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 FAM184BQ9ULE4 1060 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHD4-210ENST00000544040 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 ELP1O95163 1332 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 TAF12Q16514 161 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 NUF2Q9BZD4 464 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 AMOTL2Q9Y2J4 779 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 ITIH3Q06033 890 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 PDE4DQ08499 809 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 HS1BP3Q53T59 392 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 CYP26C1Q6V0L0 522 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 TFCP2Q12800 502 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 ASIC2Q16515 512 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 BRAPQ7Z569 592 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
CHD4-210ENST00000544040 BACH1O14867 736 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 VSIG1Q86XK7 387 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 MGARPQ8TDB4 240 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 RNF34Q969K3 372 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHD4-210ENST00000544040 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
CHD4-210ENST00000544040 UIMC1Q96RL1 719 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 WDR44Q5JSH3 913 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 STK38LQ9Y2H1 464 aa17.28■□□□□ 0.36
CHD4-210ENST00000544040 SUPT6HQ7KZ85 1726 aaKnown RBP17.28■□□□□ 0.36
CHD4-210ENST00000544040 DTNBO60941 627 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 DISP3Q9P2K9 1392 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 SEC24BO95487 1268 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 IL15P40933 162 aaPredicted RBP17.27■□□□□ 0.36
CHD4-210ENST00000544040 CCDC62Q6P9F0 684 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 ZNF365Q70YC5 407 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 SAP30BPQ9UHR5 308 aaKnown RBP17.27■□□□□ 0.36
CHD4-210ENST00000544040 USTQ9Y2C2 406 aa17.27■□□□□ 0.36
CHD4-210ENST00000544040 SMC5Q8IY18 1101 aa17.27■□□□□ 0.35
CHD4-210ENST00000544040 GDAP1L1Q96MZ0 367 aa17.27■□□□□ 0.35
CHD4-210ENST00000544040 RRAGDQ9NQL2 400 aaPredicted RBP17.27■□□□□ 0.35
CHD4-210ENST00000544040 ERCC6LQ2NKX8 1250 aa17.27■□□□□ 0.35
CHD4-210ENST00000544040 KIFAP3Q92845 792 aa17.27■□□□□ 0.35
CHD4-210ENST00000544040 TACO1Q9BSH4 297 aaKnown RBP17.27■□□□□ 0.35
CHD4-210ENST00000544040 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 IFT20Q8IY31 132 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 GOLGA6BA6NDN3 693 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 ACTN4O43707 911 aaKnown RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 RPL13P26373 211 aaKnown RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 ATP6V1AP38606 617 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 HHATQ5VTY9 493 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 DDX27Q96GQ7 796 aaKnown RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 TSNAXIP1Q2TAA8 658 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 MAEAQ7L5Y9 396 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 ZNF804AQ7Z570 1209 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
CHD4-210ENST00000544040 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
CHD4-210ENST00000544040 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 CCDC169A6NNP5 214 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 STX10O60499 249 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 CCNT1O60563 726 aaKnown RBP17.25■□□□□ 0.35
CHD4-210ENST00000544040 GNA11P29992 359 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 TRAF1Q13077 416 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 ASIC3Q9UHC3 531 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 TUBBP07437 444 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 IL16Q14005 1332 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 DAPK3O43293 454 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 FANCCQ00597 558 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
CHD4-210ENST00000544040 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHD4-210ENST00000544040 CEP104O60308 925 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 PIK3AP1Q6ZUJ8 805 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 SYNRGQ9UMZ2 1314 aa17.25■□□□□ 0.35
CHD4-210ENST00000544040 TROQ12816 1431 aaPredicted RBP17.25■□□□□ 0.35
CHD4-210ENST00000544040 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms