RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 NID2Q14112 1375 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 LRP6O75581 1613 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 ETF1P62495 437 aaKnown RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 TRDNQ13061 729 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 NKX1-1Q15270 411 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 OTUD7BQ6GQQ9 843 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 ERCC4Q92889 916 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 ZNF594Q96JF6 807 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 NOL10Q9BSC4 688 aaKnown RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
VPS33A-208ENST00000543633 GPHNQ9NQX3 736 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-208ENST00000543633 GPAA1O43292 621 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 CUTAO60888 179 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 RESP18Q5W5W9 173 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 TMEM87BQ96K49 555 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 PUS3Q9BZE2 481 aaKnown RBP15.84■□□□□ 0.13
VPS33A-208ENST00000543633 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.84■□□□□ 0.13
VPS33A-208ENST00000543633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.84■□□□□ 0.13
VPS33A-208ENST00000543633 MYH3P11055 1940 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 CHD4Q14839 1912 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-208ENST00000543633 SLFN14P0C7P3 912 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 HAND2P61296 217 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 BMS1Q14692 1282 aaKnown RBP15.84■□□□□ 0.13
VPS33A-208ENST00000543633 PTPAQ15257 358 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-208ENST00000543633 TOM1L2Q6ZVM7 507 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 CARD10Q9BWT7 1032 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 HSD3B7Q9H2F3 369 aa15.84■□□□□ 0.13
VPS33A-208ENST00000543633 ANKRD36CQ5JPF3 1778 aa15.83■□□□□ 0.13
VPS33A-208ENST00000543633 GOLGA6L9A6NEM1 432 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 SH2B2O14492 632 aaPredicted RBP15.83■□□□□ 0.12
VPS33A-208ENST00000543633 CSF1RP07333 972 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 METAP2P50579 478 aaKnown RBP eCLIP15.83■□□□□ 0.12
VPS33A-208ENST00000543633 TCIRG1Q13488 830 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 SYT10Q6XYQ8 523 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 VPS37DQ86XT2 251 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 CDHR2Q9BYE9 1310 aa15.83■□□□□ 0.12
VPS33A-208ENST00000543633 LRP5O75197 1615 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-208ENST00000543633 TPM1P09493 284 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 TERF2Q15554 542 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ZNF771Q7L3S4 317 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-208ENST00000543633 VSTM4Q8IW00 320 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 CERKQ8TCT0 537 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 PUS7LQ9H0K6 701 aaKnown RBP15.82■□□□□ 0.12
VPS33A-208ENST00000543633 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 HOOK1Q9UJC3 728 aaKnown RBP15.82■□□□□ 0.12
VPS33A-208ENST00000543633 DOCK2Q92608 1830 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-208ENST00000543633 BIN1O00499 593 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ZSCAN12O43309 604 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ADORA1P30542 326 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ADD2P35612 726 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ZAP70P43403 619 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 UBASH3AP57075 661 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 UBE3CQ15386 1083 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 KRT40Q6A162 431 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 FBXW7Q969H0 707 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
VPS33A-208ENST00000543633 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-208ENST00000543633 ALX1Q15699 326 aa15.81■□□□□ 0.12
VPS33A-208ENST00000543633 APOA5Q6Q788 366 aa15.81■□□□□ 0.12
VPS33A-208ENST00000543633 SGMS1Q86VZ5 419 aa15.81■□□□□ 0.12
VPS33A-208ENST00000543633 MAP3K14Q99558 947 aa15.81■□□□□ 0.12
VPS33A-208ENST00000543633 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
VPS33A-208ENST00000543633 ARGLU1Q9NWB6 273 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-208ENST00000543633 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
VPS33A-208ENST00000543633 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 PPFIA3O75145 1194 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 A1BGP04217 495 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 TRIM29Q14134 588 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 SHC4Q6S5L8 630 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
VPS33A-208ENST00000543633 ATP8B1O43520 1251 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 EVA1CP58658 441 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 IFIT5Q13325 482 aaKnown RBP15.8■□□□□ 0.12
VPS33A-208ENST00000543633 SCARF1Q14162 830 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 TAF7LQ5H9L4 462 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 CCDC102BQ68D86 513 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 WASF1Q92558 559 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 NBPF3Q9H094 633 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 DACH1Q9UI36 760 aa15.8■□□□□ 0.12
VPS33A-208ENST00000543633 SERPINC1P01008 464 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 LIFRP42702 1097 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 KRBA2Q6ZNG9 492 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 HOMER1Q86YM7 354 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-208ENST00000543633 MPHOSPH8Q99549 860 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
VPS33A-208ENST00000543633 V9GYY5 206 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-208ENST00000543633 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 PLCH1Q4KWH8 1693 aa15.79■□□□□ 0.12
VPS33A-208ENST00000543633 CCDC66A2RUB6 948 aa15.78■□□□□ 0.12
VPS33A-208ENST00000543633 EFCAB8A8MWE9 144 aa15.78■□□□□ 0.12
VPS33A-208ENST00000543633 ZBTB43O43298 467 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms