RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 GMLQ99445 158 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
DDB1-221ENST00000543162 MRIQ9BWK5 157 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 CTNNA3Q9UI47 895 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 DAGLAQ9Y4D2 1042 aa12.75□□□□□ -0.37
DDB1-221ENST00000543162 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
DDB1-221ENST00000543162 GSG1L2A8MUP6 293 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 PRKAB2O43741 272 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 ZKSCAN1P17029 563 aaPredicted RBP12.74□□□□□ -0.37
DDB1-221ENST00000543162 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDB1-221ENST00000543162 ALX1Q15699 326 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 SH3RF3Q8TEJ3 882 aaPredicted RBP12.74□□□□□ -0.37
DDB1-221ENST00000543162 RNF181Q9P0P0 153 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
DDB1-221ENST00000543162 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
DDB1-221ENST00000543162 SLC27A2O14975 620 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 FGAP02671 866 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 USP17L8P0C7I0 530 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
DDB1-221ENST00000543162 TDO2P48775 406 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 ANAPC15P60006 121 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 SDR42E1Q8WUS8 393 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 NAPBQ9H115 298 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 PALD1Q9ULE6 856 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
DDB1-221ENST00000543162 ZMYM6O95789 1325 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 ZNF541Q9H0D2 1346 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 USP5P45974 858 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
DDB1-221ENST00000543162 C9orf131Q5VYM1 1079 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 GIMAP6Q6P9H5 292 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 KCNB2Q92953 911 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 EPB41L4AQ9HCS5 686 aaPredicted RBP12.72□□□□□ -0.37
DDB1-221ENST00000543162 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 SNX14Q9Y5W7 946 aa12.72□□□□□ -0.37
DDB1-221ENST00000543162 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 CYP21A2P08686 494 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.37
DDB1-221ENST00000543162 GMPSP49915 693 aaPredicted RBP12.71□□□□□ -0.37
DDB1-221ENST00000543162 MMP14P50281 582 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 RHBDL3P58872 404 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 CFAP100Q494V2 611 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 APOBEC3HQ6NTF7 200 aaKnown RBP12.71□□□□□ -0.37
DDB1-221ENST00000543162 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 KIF2CQ99661 725 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
DDB1-221ENST00000543162 GOLGB1Q14789 3259 aaKnown RBP12.71□□□□□ -0.38
DDB1-221ENST00000543162 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.38
DDB1-221ENST00000543162 ZNF213O14771 459 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 HAND2P61296 217 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 KRT32Q14532 448 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 CDC42EP5Q6NZY7 148 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 GPC2Q8N158 579 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 TGFBRAP1Q8WUH2 860 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 DPF2Q92785 391 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
DDB1-221ENST00000543162 DCP1AQ9NPI6 582 aaPredicted RBP12.7□□□□□ -0.38
DDB1-221ENST00000543162 RABEP1Q15276 862 aa12.69□□□□□ -0.38
DDB1-221ENST00000543162 MAPKAPK5Q8IW41 473 aa12.69□□□□□ -0.38
DDB1-221ENST00000543162 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
DDB1-221ENST00000543162 TAF6LQ9Y6J9 622 aa12.69□□□□□ -0.38
DDB1-221ENST00000543162 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 CDK5RAP2Q96SN8 1893 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 LAMA4Q16363 1823 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 USP17L21D6R901 530 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 PSMA5P28066 241 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 CTR9Q6PD62 1173 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 PRMT6Q96LA8 375 aaPredicted RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 TM6SF1Q9BZW5 370 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 TDRD3Q9H7E2 651 aaKnown RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 MYOZ2Q9NPC6 264 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 MCM9Q9NXL9 1143 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 CNOT7Q9UIV1 285 aaKnown RBP12.68□□□□□ -0.38
DDB1-221ENST00000543162 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
DDB1-221ENST00000543162 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 FLT1P17948 1338 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 SHTN1A0MZ66 631 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 E7EWF7 191 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 H7C1D1 291 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms