RNA–Protein interactions for RNA: ENST00000543054.5

TSG101-207, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-207ENST00000543054 PPT2Q9UMR5 302 aa6.91□□□□□ -1.3
TSG101-207ENST00000543054 PHF24Q9UPV7 400 aa6.91□□□□□ -1.3
TSG101-207ENST00000543054 EEA1Q15075 1411 aa6.91□□□□□ -1.3
TSG101-207ENST00000543054 KIF27Q86VH2 1401 aa6.91□□□□□ -1.3
TSG101-207ENST00000543054 CUL7Q14999 1698 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 FAM221AA4D161 298 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
TSG101-207ENST00000543054 CTBSQ01459 385 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 RAB33AQ14088 237 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 ALYREFQ86V81 257 aaKnown RBP6.9□□□□□ -1.3
TSG101-207ENST00000543054 GAL3ST3Q96A11 431 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
TSG101-207ENST00000543054 DNAJB12Q9NXW2 375 aaKnown RBP6.9□□□□□ -1.3
TSG101-207ENST00000543054 GDF2Q9UK05 429 aaPredicted RBP6.9□□□□□ -1.3
TSG101-207ENST00000543054 TDRD9Q8NDG6 1382 aaKnown RBP6.9□□□□□ -1.31
TSG101-207ENST00000543054 SHISA8B8ZZ34 492 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
TSG101-207ENST00000543054 BMP6P22004 513 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 SNRPNP63162 240 aaKnown RBP6.89□□□□□ -1.31
TSG101-207ENST00000543054 SEPT6Q14141 434 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 NFE2L2Q16236 605 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 SEZ6Q53EL9 994 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 NKD1Q969G9 470 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 SPACA7Q96KW9 195 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 SRRTQ9BXP5 876 aaKnown RBP6.89□□□□□ -1.31
TSG101-207ENST00000543054 SNTG2Q9NY99 539 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 PRKAG3Q9UGI9 489 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 MKL2Q9ULH7 1088 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.89□□□□□ -1.31
TSG101-207ENST00000543054 SBNO2Q9Y2G9 1366 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 IFT140Q96RY7 1462 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 CHD1O14646 1710 aa6.89□□□□□ -1.31
TSG101-207ENST00000543054 ADAMTS12P58397 1594 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 AQRO60306 1485 aaKnown RBP eCLIP6.88□□□□□ -1.31
TSG101-207ENST00000543054 GAPVD1Q14C86 1478 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 RAPGEF2Q9Y4G8 1499 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 FAM221BA6H8Z2 402 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 C2CD2LO14523 706 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 B3GALT4O96024 378 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 EIF2AK2P19525 551 aaKnown RBP6.88□□□□□ -1.31
TSG101-207ENST00000543054 SYT9Q86SS6 491 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 CELF2-AS1Q8N7Q2 184 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 MKL1Q969V6 931 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 CLEC4MQ9H2X3 399 aaPredicted RBP6.88□□□□□ -1.31
TSG101-207ENST00000543054 TMEM39AQ9NV64 488 aa6.88□□□□□ -1.31
TSG101-207ENST00000543054 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
TSG101-207ENST00000543054 PCDH1Q08174 1060 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 ZNF423Q2M1K9 1284 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 ZNF468Q5VIY5 522 aaPredicted RBP6.87□□□□□ -1.31
TSG101-207ENST00000543054 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
TSG101-207ENST00000543054 GOLGA6L1Q8N7Z2 621 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 GATAD2BQ8WXI9 593 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 MRFAP1L1Q96HT8 127 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 MDFIQ99750 246 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 UBE2OQ9C0C9 1292 aaKnown RBP6.87□□□□□ -1.31
TSG101-207ENST00000543054 SIRPGQ9P1W8 387 aa6.87□□□□□ -1.31
TSG101-207ENST00000543054 GOLGA3Q08378 1498 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 KRBA1A5PL33 1030 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 CILPO75339 1184 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 SELPP16109 830 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 NCLP19338 710 aaKnown RBP6.86□□□□□ -1.31
TSG101-207ENST00000543054 TBC1D8BQ0IIM8 1120 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 XP32Q5T750 250 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 CEP135Q66GS9 1140 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 SLCO4C1Q6ZQN7 724 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 CCDC84Q86UT8 332 aaPredicted RBP6.86□□□□□ -1.31
TSG101-207ENST00000543054 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 BSNDQ8WZ55 320 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 RNPC3Q96LT9 517 aaKnown RBP6.86□□□□□ -1.31
TSG101-207ENST00000543054 DEPDC7Q96QD5 511 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 SRPK1Q96SB4 655 aaKnown RBP6.86□□□□□ -1.31
TSG101-207ENST00000543054 TRIM55Q9BYV6 548 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 IGFLR1Q9H665 355 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 KLF15Q9UIH9 416 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 SLC6A14Q9UN76 642 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 MSRB2Q9Y3D2 182 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 ERICH3Q5RHP9 1530 aa6.86□□□□□ -1.31
TSG101-207ENST00000543054 ROBO2Q9HCK4 1378 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 GHRHP01286 108 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 CPB1P15086 417 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 NME2P22392 152 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 COL8A1P27658 744 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 GIPRP48546 466 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 PTPN11Q06124 597 aaPredicted RBP6.85□□□□□ -1.31
TSG101-207ENST00000543054 MPP2Q14168 576 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 PERM1Q5SV97 790 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 EDARADDQ8WWZ3 215 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 MIR1-1HGQ9H1L0 117 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 KANSL2Q9H9L4 492 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 ZNRF3Q9ULT6 936 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 TRIM33Q9UPN9 1127 aa6.85□□□□□ -1.31
TSG101-207ENST00000543054 PRXQ9BXM0 1461 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms