RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 AIFM3Q96NN9 605 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 COL15A1P39059 1388 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 UBE2HP62256 183 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 NLGN1Q8N2Q7 840 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 A0A087WWV3 80 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-208ENST00000542570 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
TOP3A-208ENST00000542570 KIF5BP33176 963 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 MCM7P33993 719 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 ZNF174Q15697 407 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 CPLX3Q8WVH0 158 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 USP40Q9NVE5 1235 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 VPS54Q9P1Q0 977 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 NARFQ9UHQ1 456 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-208ENST00000542570 C21orf2O43822 256 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 AKNAD1Q5T1N1 836 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 WDR66Q8TBY9 1149 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 ARHGAP23Q9P227 1491 aa11.71□□□□□ -0.53
TOP3A-208ENST00000542570 NAPAP54920 295 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 PPARAQ07869 468 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 MTX1Q13505 466 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 JCADQ9P266 1359 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 SPATA31A5Q5VU36 1347 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 SPATA31A7Q8IWB4 1347 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 FAM196BA6NMK8 535 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.54
TOP3A-208ENST00000542570 GNAT2P19087 354 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 CHRNA5P30532 468 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 ZNF165P49910 485 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.54
TOP3A-208ENST00000542570 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 DNAJC25Q9H1X3 360 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.54
TOP3A-208ENST00000542570 TCP10L2B9ZVM9 353 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 TNNI2P48788 182 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 CFAP100Q494V2 611 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 ENOX2Q16206 610 aaKnown RBP11.7□□□□□ -0.54
TOP3A-208ENST00000542570 EYA3Q99504 573 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 CYP2D6P10635 497 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 VPS72Q15906 364 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 CPVLQ9H3G5 476 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
TOP3A-208ENST00000542570 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-208ENST00000542570 MYO1BO43795 1136 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 BTDP43251 543 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-208ENST00000542570 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
TOP3A-208ENST00000542570 TANGO6Q9C0B7 1094 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 CIAO1O76071 339 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 SCRN1Q12765 414 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 UBE4AQ14139 1066 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 DHX58Q96C10 678 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 SPTLC2O15270 562 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 TPM1P09493 284 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 ADD2P35612 726 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 UBA7P41226 1012 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
TOP3A-208ENST00000542570 DSCC1Q9BVC3 393 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
TOP3A-208ENST00000542570 LETM1O95202 739 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-208ENST00000542570 TPM3P06753 285 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 ERCC3P19447 782 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 SYKP43405 635 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 SP4Q02446 784 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 INTS5Q6P9B9 1019 aaKnown RBP11.68□□□□□ -0.54
TOP3A-208ENST00000542570 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 DIS3L2Q8IYB7 885 aaKnown RBP11.68□□□□□ -0.54
TOP3A-208ENST00000542570 TMTC2Q8N394 836 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 SLIT1O75093 1534 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 LIG1P18858 919 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 KLRK1P26718 216 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 NAP1L1P55209 391 aaKnown RBP11.68□□□□□ -0.54
TOP3A-208ENST00000542570 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 MXD3Q9BW11 206 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 RIPOR2Q9Y4F9 1068 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 TNKSO95271 1327 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 STX17P56962 302 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 MECOMQ03112 1051 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 ZSWIM5Q9P217 1185 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
TOP3A-208ENST00000542570 PIK3AP1Q6ZUJ8 805 aa11.67□□□□□ -0.54
TOP3A-208ENST00000542570 SPICE1Q8N0Z3 855 aa11.67□□□□□ -0.54
TOP3A-208ENST00000542570 CPXCR1Q8N123 301 aa11.67□□□□□ -0.54
TOP3A-208ENST00000542570 MAPK8IP1Q9UQF2 711 aa11.67□□□□□ -0.54
TOP3A-208ENST00000542570 FRMPD2Q68DX3 1309 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms