RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 ORC1Q13415 861 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 SPRED2Q7Z698 418 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 POU5F2Q8N7G0 328 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 DDX54Q8TDD1 881 aaKnown RBP9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 BRPF3Q9ULD4 1205 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 JAG1P78504 1218 aa9.47□□□□□ -0.89
SRGAP1-204ENST00000542381 LCE1DQ5T752 114 aa9.47□□□□□ -0.89
SRGAP1-204ENST00000542381 WDR89Q96FK6 387 aaPredicted RBP9.47□□□□□ -0.89
SRGAP1-204ENST00000542381 NPHS2Q9NP85 383 aa9.47□□□□□ -0.89
SRGAP1-204ENST00000542381 SLC5A6Q9Y289 635 aa9.47□□□□□ -0.89
SRGAP1-204ENST00000542381 PAPLNO95428 1278 aa9.46□□□□□ -0.9
SRGAP1-204ENST00000542381 LIG1P18858 919 aa9.46□□□□□ -0.9
SRGAP1-204ENST00000542381 BNIP3Q12983 259 aa9.45□□□□□ -0.9
SRGAP1-204ENST00000542381 C1orf115Q9H7X2 142 aa9.45□□□□□ -0.9
SRGAP1-204ENST00000542381 EGFL7Q9UHF1 273 aa9.45□□□□□ -0.9
SRGAP1-204ENST00000542381 H3BRB1 525 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 TMPRSS2O15393 492 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 NEFLP07196 543 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 SERPINB4P48594 390 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 ZNF157P51786 506 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 CDK5R2Q13319 367 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 PLCL1Q15111 1095 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 TUT1Q9H6E5 874 aaKnown RBP9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 CCDC86Q9H6F5 360 aaKnown RBP9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
SRGAP1-204ENST00000542381 SYNGAP1Q96PV0 1343 aa9.43□□□□□ -0.9
SRGAP1-204ENST00000542381 CPNE3O75131 537 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-204ENST00000542381 ARHGAP4P98171 946 aa9.43□□□□□ -0.9
SRGAP1-204ENST00000542381 AP3B2Q13367 1082 aa9.43□□□□□ -0.9
SRGAP1-204ENST00000542381 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
SRGAP1-204ENST00000542381 CRIM1Q9NZV1 1036 aa9.43□□□□□ -0.9
SRGAP1-204ENST00000542381 FAAP100Q0VG06 881 aa9.42□□□□□ -0.9
SRGAP1-204ENST00000542381 CYP27C1Q4G0S4 372 aa9.42□□□□□ -0.9
SRGAP1-204ENST00000542381 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
SRGAP1-204ENST00000542381 PLD6Q8N2A8 252 aaKnown RBP9.42□□□□□ -0.9
SRGAP1-204ENST00000542381 FAM181AQ8N9Y4 354 aa9.42□□□□□ -0.9
SRGAP1-204ENST00000542381 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
SRGAP1-204ENST00000542381 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-204ENST00000542381 FANCD2OSQ96PS1 177 aa9.41□□□□□ -0.9
SRGAP1-204ENST00000542381 FAM129BQ96TA1 746 aa9.41□□□□□ -0.9
SRGAP1-204ENST00000542381 KRTAP4-7Q9BYR0 210 aa9.41□□□□□ -0.9
SRGAP1-204ENST00000542381 U3KQE9 123 aa9.41□□□□□ -0.9
SRGAP1-204ENST00000542381 ZNF862O60290 1169 aa9.4□□□□□ -0.9
SRGAP1-204ENST00000542381 PRPF40BQ6NWY9 871 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-204ENST00000542381 STK11IPQ8N1F8 1099 aa9.4□□□□□ -0.9
SRGAP1-204ENST00000542381 CCDC74AQ96AQ1 378 aa9.4□□□□□ -0.9
SRGAP1-204ENST00000542381 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.4□□□□□ -0.9
SRGAP1-204ENST00000542381 CARMIL2Q6F5E8 1435 aa9.39□□□□□ -0.91
SRGAP1-204ENST00000542381 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
SRGAP1-204ENST00000542381 NDUFB5O43674 189 aa9.39□□□□□ -0.91
SRGAP1-204ENST00000542381 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
SRGAP1-204ENST00000542381 DISC1Q9NRI5 854 aa9.39□□□□□ -0.91
SRGAP1-204ENST00000542381 EIF1AYO14602 144 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 CD8BP10966 210 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 CD96P40200 585 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 ID3Q02535 119 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 ZNF648Q5T619 568 aaPredicted RBP9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 GLIS3Q8NEA6 775 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
SRGAP1-204ENST00000542381 GPR182O15218 404 aa9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 IGHA2P01877 340 aa9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 SLFN14P0C7P3 912 aa9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 SMYD4Q8IYR2 804 aaPredicted RBP9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 MISP3Q96FF7 219 aa9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 PCDHGC5Q9Y5F6 944 aa9.37□□□□□ -0.91
SRGAP1-204ENST00000542381 LEFTY1O75610 366 aa9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 FUT4P22083 530 aa9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 GRM2Q14416 872 aa9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 TTLL4Q14679 1199 aa9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 KIF4BQ2VIQ3 1234 aa9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 EPS8L3Q8TE67 593 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 ADAMTS6Q9UKP5 1117 aa9.36□□□□□ -0.91
SRGAP1-204ENST00000542381 BIN1O00499 593 aa9.35□□□□□ -0.91
SRGAP1-204ENST00000542381 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-204ENST00000542381 GSTP1P09211 210 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-204ENST00000542381 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
SRGAP1-204ENST00000542381 DNAJC25Q9H1X3 360 aa9.35□□□□□ -0.91
SRGAP1-204ENST00000542381 MBNL3Q9NUK0 354 aaKnown RBP9.35□□□□□ -0.91
SRGAP1-204ENST00000542381 RNGTTO60942 597 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-204ENST00000542381 ZNF124Q15973 351 aa9.34□□□□□ -0.91
SRGAP1-204ENST00000542381 HOMEZQ8IX15 550 aa9.34□□□□□ -0.91
SRGAP1-204ENST00000542381 RC3H2Q9HBD1 1191 aaKnown RBP9.34□□□□□ -0.91
SRGAP1-204ENST00000542381 SUPT5HO00267 1087 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 ATG4DQ86TL0 474 aaPredicted RBP9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 CITED4Q96RK1 184 aa9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 KRT82Q9NSB4 513 aa9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 VAV3Q9UKW4 847 aa9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 USTQ9Y2C2 406 aa9.33□□□□□ -0.92
SRGAP1-204ENST00000542381 NEFMP07197 916 aa9.32□□□□□ -0.92
SRGAP1-204ENST00000542381 PRKCQQ04759 706 aa9.32□□□□□ -0.92
SRGAP1-204ENST00000542381 B4GALNT3Q6L9W6 998 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms