RNA–Protein interactions for RNA: ENST00000542207.5

RNF10-215, Transcript of ring finger protein 10, human

TSL 4

Gene RNF10, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-215	ENST00000542207	NT5C2	P49902	561 aa		10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	GTF2I	P78347	998 aa		10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	ADGRA1	Q86SQ6	560 aa		10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	STAG1	Q8WVM7	1258 aa		10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.82	□□□□□ -0.68	2e-6	■■□□□ 12.9
RNF10-215	ENST00000542207	GBP4	Q96PP9	640 aa		10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	SMC3	Q9UQE7	1217 aa		10.82	□□□□□ -0.68
RNF10-215	ENST00000542207	KIF13B	Q9NQT8	1826 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	PRC1	O43663	620 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	PRKAB2	O43741	272 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	DPEP1	P16444	411 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	USP5	P45974	858 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	FKBP1A	P62942	108 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	DYNLL1	P63167	89 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	PPARA	Q07869	468 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	TOB2	Q14106	344 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	SART3	Q15020	963 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	R3HDM1	Q15032	1099 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	RAB3GAP1	Q15042	981 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	AKNAD1	Q5T1N1	836 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	OLFM4	Q6UX06	510 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	MFSD6	Q6ZSS7	791 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	TBC1D10C	Q8IV04	446 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	CCDC83	Q8IWF9	413 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	FBXL16	Q8N461	479 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	SDR42E1	Q8WUS8	393 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	BRF1	Q92994	677 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	TMEM87B	Q96K49	555 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	TCEANC2	Q96MN5	208 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	ANAPC4	Q9UJX5	808 aa		10.81	□□□□□ -0.68
RNF10-215	ENST00000542207	SLX4	Q8IY92	1834 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	ERICH2	A1L162	156 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	PPIP5K2	O43314	1243 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	C21orf2	O43822	256 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	ECE2	O60344	883 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	PTMS	P20962	102 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	BTD	P43251	543 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	PPP4C	P60510	307 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	EXOSC10	Q01780	885 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	KIAA2012	Q0VF49	1180 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	DOK7	Q18PE1	504 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	ZNF384	Q8TF68	577 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	C7orf43	Q8WVR3	580 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	FAM163A	Q96GL9	167 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	PSMD1	Q99460	953 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	MTA3	Q9BTC8	594 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	AGXT2	Q9BYV1	514 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	VPS33B	Q9H267	617 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	TOMM22	Q9NS69	142 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	PIM2	Q9P1W9	311 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	TPCN1	Q9ULQ1	816 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	KIF3A	Q9Y496	699 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	GAK	O14976	1311 aa		10.8	□□□□□ -0.68
RNF10-215	ENST00000542207	SNED1	Q8TER0	1413 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207		A0A0G2JLW4	131 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	MINDY4B	A8MYZ0	360 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	GOLGA6L22	H0YM25	854 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	PDC	P20941	246 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	DIXDC1	Q155Q3	683 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	ME3	Q16798	604 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	STRIP1	Q5VSL9	837 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	ESR2	Q92731	530 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	GTF3C6	Q969F1	213 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	ZNF274	Q96GC6	653 aa	Predicted RBP	10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	ANP32E	Q9BTT0	268 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	DBNDD1	Q9H9R9	158 aa		10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	WDR33	Q9C0J8	1336 aa	Known RBP	10.79	□□□□□ -0.68
RNF10-215	ENST00000542207	GPR75-ASB3	A0A0A6YYF3	556 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	USP17L3	A6NCW0	530 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	USP17L4	A6NCW7	530 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	DDX11L8	A8MPP1	907 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207		B4E1Z4	1266 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	DHX16	O60231	1041 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	LARGE1	O95461	756 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	CTDSPL2	Q05D32	466 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	PDE4B	Q07343	736 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	NBR1	Q14596	966 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	NFKBIB	Q15653	356 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	AOC3	Q16853	763 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	SBK1	Q52WX2	424 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	DALRD3	Q5D0E6	543 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	USP17L1	Q7RTZ2	530 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	TEX11	Q8IYF3	940 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	TEKT1	Q969V4	418 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	LARP6	Q9BRS8	491 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	LLPH	Q9BRT6	129 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	LRRC2	Q9BYS8	371 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	NBPF3	Q9H094	633 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	ZNF287	Q9HBT7	754 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	MCM9	Q9NXL9	1143 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	ANGEL1	Q9UNK9	670 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	TTF2	Q9UNY4	1162 aa	Known RBP	10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	CD2AP	Q9Y5K6	639 aa		10.78	□□□□□ -0.68
RNF10-215	ENST00000542207	NEDD4	P46934	1319 aa		10.78	□□□□□ -0.68

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