RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 COL4A1P02462 1669 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 A0A0G2JLW4 131 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 POLR3GO15318 223 aaPredicted RBP10.61□□□□□ -0.71
THBS3-211ENST00000541990 PDE8AO60658 829 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 PNMA6AP0CW24 399 aaPredicted RBP10.61□□□□□ -0.71
THBS3-211ENST00000541990 CYP2C19P33261 490 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 GUCY1B3Q02153 619 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 NFIXQ14938 502 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 USP28Q96RU2 1077 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 CSF1RP07333 972 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 KLRK1P26718 216 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 EZH2Q15910 746 aaKnown RBP10.61□□□□□ -0.71
THBS3-211ENST00000541990 ARHGAP29Q52LW3 1261 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 ZNF772Q68DY9 489 aaPredicted RBP10.61□□□□□ -0.71
THBS3-211ENST00000541990 OLFM4Q6UX06 510 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 WNK3Q9BYP7 1800 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 H3BQV1 296 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 TULP2O00295 520 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 PSMA5P28066 241 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 XAGE2Q96GT9 111 aa10.61□□□□□ -0.71
THBS3-211ENST00000541990 GOLGA8FQ08AF8 430 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 GOLGA8DPQ0D2H9 430 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 SCRN1Q12765 414 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 L2HGDHQ9H9P8 463 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 LAMB4A4D0S4 1761 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 MED23Q9ULK4 1368 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 HSP90B1P14625 803 aaKnown RBP10.6□□□□□ -0.71
THBS3-211ENST00000541990 ST5P78524 1137 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 DPCR1Q3MIW9 517 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 CCDC93Q567U6 631 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 Q6ZUG5 572 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
THBS3-211ENST00000541990 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
THBS3-211ENST00000541990 ZNF219Q9P2Y4 722 aaPredicted RBP10.6□□□□□ -0.71
THBS3-211ENST00000541990 NARFQ9UHQ1 456 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 RIPOR2Q9Y4F9 1068 aa10.6□□□□□ -0.71
THBS3-211ENST00000541990 N4BP2Q86UW6 1770 aaPredicted RBP10.6□□□□□ -0.71
THBS3-211ENST00000541990 PHKA1P46020 1223 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 BCAMP50895 628 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 XPO4Q9C0E2 1151 aaKnown RBP10.59□□□□□ -0.71
THBS3-211ENST00000541990 HDAC5Q9UQL6 1122 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 TAF1P21675 1872 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 BTAF1O14981 1849 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 BIN1O00499 593 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 NEMFO60524 1076 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 SMC2O95347 1197 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 IL15P40933 162 aaPredicted RBP10.59□□□□□ -0.71
THBS3-211ENST00000541990 ZAP70P43403 619 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 FSIP1Q8NA03 581 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 ENGASEQ8NFI3 743 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 IFNKQ9P0W0 207 aa10.59□□□□□ -0.71
THBS3-211ENST00000541990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.59□□□□□ -0.71
THBS3-211ENST00000541990 SASH3O75995 380 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 CTDNEP1O95476 244 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 RAD51AP2Q09MP3 1159 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 BMS1Q14692 1282 aaKnown RBP10.58□□□□□ -0.72
THBS3-211ENST00000541990 NCOA5Q9HCD5 579 aaKnown RBP10.58□□□□□ -0.72
THBS3-211ENST00000541990 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 A0A1B0GVL5 298 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 GYS1P13807 737 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 GYS2P54840 703 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 CCT2P78371 535 aaKnown RBP10.58□□□□□ -0.72
THBS3-211ENST00000541990 ISM2Q6H9L7 571 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 STOX1Q6ZVD7 989 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 COL23A1Q86Y22 540 aaPredicted RBP10.58□□□□□ -0.72
THBS3-211ENST00000541990 STK11IPQ8N1F8 1099 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 TMX1Q9H3N1 280 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.72
THBS3-211ENST00000541990 ZRANB2O95218 330 aaKnown RBP eCLIP10.57□□□□□ -0.72
THBS3-211ENST00000541990 IFIT1P09914 478 aaKnown RBP10.57□□□□□ -0.72
THBS3-211ENST00000541990 GYG1P46976 350 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 SMARCE1Q969G3 411 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 ZNF652Q9Y2D9 606 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 THSD7AQ9UPZ6 1657 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 NUP188Q5SRE5 1749 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 KINO60870 393 aaKnown RBP10.57□□□□□ -0.72
THBS3-211ENST00000541990 OTUD7BQ6GQQ9 843 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 GPATCH3Q96I76 525 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 OSBPL5Q9H0X9 879 aaPredicted RBP10.57□□□□□ -0.72
THBS3-211ENST00000541990 BRWD3Q6RI45 1802 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 ME1P48163 572 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 CHRNDQ07001 517 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 DDR1Q08345 913 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 TTC39AQ5SRH9 613 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 CCDC73Q6ZRK6 1079 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 CEP57L1Q8IYX8 460 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 NSUN7Q8NE18 718 aaKnown RBP10.57□□□□□ -0.72
THBS3-211ENST00000541990 IPO4Q8TEX9 1081 aaKnown RBP10.57□□□□□ -0.72
THBS3-211ENST00000541990 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms