RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 MYO5AQ9Y4I1 1855 aaKnown RBP25.37■■□□□ 1.65
MSRB3-211ENST00000541897 TCRBV5S4A2TA0A5A2 114 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 SHTN1A0MZ66 631 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 DLGAP5Q15398 846 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 DIXDC1Q155Q3 683 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 CFAP100Q494V2 611 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 MAGEB6Q8N7X4 407 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 RILPL2Q969X0 211 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 DAGLAQ9Y4D2 1042 aa25.37■■□□□ 1.65
MSRB3-211ENST00000541897 SPDYE2BA6NHP3 402 aa25.36■■□□□ 1.65
MSRB3-211ENST00000541897 RNF113AO15541 343 aaKnown RBP25.36■■□□□ 1.65
MSRB3-211ENST00000541897 SPDYE6P0CI01 402 aa25.36■■□□□ 1.65
MSRB3-211ENST00000541897 FMR1Q06787 632 aaKnown RBP eCLIP25.36■■□□□ 1.65
MSRB3-211ENST00000541897 KIF4BQ2VIQ3 1234 aa25.36■■□□□ 1.65
MSRB3-211ENST00000541897 ZNF532Q9HCE3 1301 aa25.36■■□□□ 1.65
MSRB3-211ENST00000541897 GPR75-ASB3A0A0A6YYF3 556 aa25.35■■□□□ 1.65
MSRB3-211ENST00000541897 HIP1O00291 1037 aa25.35■■□□□ 1.65
MSRB3-211ENST00000541897 CYP7A1P22680 504 aa25.35■■□□□ 1.65
MSRB3-211ENST00000541897 TRPM7Q96QT4 1865 aa25.34■■□□□ 1.65
MSRB3-211ENST00000541897 MYH7P12883 1935 aa25.34■■□□□ 1.65
MSRB3-211ENST00000541897 PPP4CP60510 307 aa25.34■■□□□ 1.65
MSRB3-211ENST00000541897 APOBEC3HQ6NTF7 200 aaKnown RBP25.34■■□□□ 1.65
MSRB3-211ENST00000541897 SAMD7Q7Z3H4 446 aa25.34■■□□□ 1.65
MSRB3-211ENST00000541897 WNT10BO00744 389 aa25.33■■□□□ 1.65
MSRB3-211ENST00000541897 BAG3O95817 575 aa25.33■■□□□ 1.65
MSRB3-211ENST00000541897 RBM5P52756 815 aaKnown RBP eCLIP25.33■■□□□ 1.65
MSRB3-211ENST00000541897 TRPM4Q8TD43 1214 aa25.33■■□□□ 1.65
MSRB3-211ENST00000541897 APPBP2Q92624 585 aa25.33■■□□□ 1.65
MSRB3-211ENST00000541897 MYH2Q9UKX2 1941 aa25.33■■□□□ 1.65
MSRB3-211ENST00000541897 FOXN1O15353 648 aa25.32■■□□□ 1.64
MSRB3-211ENST00000541897 EGFRP00533 1210 aa25.32■■□□□ 1.64
MSRB3-211ENST00000541897 TBC1D10BQ4KMP7 808 aaPredicted RBP25.32■■□□□ 1.64
MSRB3-211ENST00000541897 ADGRA1Q86SQ6 560 aa25.32■■□□□ 1.64
MSRB3-211ENST00000541897 ZC3H15Q8WU90 426 aaKnown RBP25.32■■□□□ 1.64
MSRB3-211ENST00000541897 PRMT6Q96LA8 375 aaPredicted RBP25.32■■□□□ 1.64
MSRB3-211ENST00000541897 MYO1BO43795 1136 aa25.31■■□□□ 1.64
MSRB3-211ENST00000541897 PLCG2P16885 1265 aa25.31■■□□□ 1.64
MSRB3-211ENST00000541897 HIRAP54198 1017 aaPredicted RBP25.31■■□□□ 1.64
MSRB3-211ENST00000541897 DEFB115Q30KQ5 88 aa25.31■■□□□ 1.64
MSRB3-211ENST00000541897 ZMYM1Q5SVZ6 1142 aa25.31■■□□□ 1.64
MSRB3-211ENST00000541897 NOL10Q9BSC4 688 aaKnown RBP25.31■■□□□ 1.64
MSRB3-211ENST00000541897 ABT1Q9ULW3 272 aaKnown RBP25.31■■□□□ 1.64
MSRB3-211ENST00000541897 AK9Q5TCS8 1911 aa25.3■■□□□ 1.64
MSRB3-211ENST00000541897 RASSF10A6NK89 507 aa25.3■■□□□ 1.64
MSRB3-211ENST00000541897 BTDP43251 543 aa25.3■■□□□ 1.64
MSRB3-211ENST00000541897 PGAP2Q9UHJ9 254 aa25.3■■□□□ 1.64
MSRB3-211ENST00000541897 TRAF5O00463 557 aa25.29■■□□□ 1.64
MSRB3-211ENST00000541897 NBPF9Q3BBW0 867 aa25.29■■□□□ 1.64
MSRB3-211ENST00000541897 RBM26Q5T8P6 1007 aaKnown RBP25.29■■□□□ 1.64
MSRB3-211ENST00000541897 RIOK1Q9BRS2 568 aaKnown RBP25.29■■□□□ 1.64
MSRB3-211ENST00000541897 HELLSQ9NRZ9 838 aa25.29■■□□□ 1.64
MSRB3-211ENST00000541897 PCDHAC2Q9Y5I4 1007 aa25.29■■□□□ 1.64
MSRB3-211ENST00000541897 SPDYE2Q495Y8 402 aa25.28■■□□□ 1.64
MSRB3-211ENST00000541897 FKBP1CQ5VVH2 108 aa25.28■■□□□ 1.64
MSRB3-211ENST00000541897 PITPNM2Q9BZ72 1349 aa25.28■■□□□ 1.64
MSRB3-211ENST00000541897 MAGEB6P1A0A0J9YX57 407 aa25.27■■□□□ 1.64
MSRB3-211ENST00000541897 RHBDL3P58872 404 aa25.27■■□□□ 1.64
MSRB3-211ENST00000541897 CDC42EP5Q6NZY7 148 aa25.27■■□□□ 1.64
MSRB3-211ENST00000541897 OSBP2Q969R2 916 aa25.27■■□□□ 1.64
MSRB3-211ENST00000541897 TDRD3Q9H7E2 651 aaKnown RBP25.27■■□□□ 1.64
MSRB3-211ENST00000541897 DIAPH3Q9NSV4 1193 aa25.27■■□□□ 1.64
MSRB3-211ENST00000541897 AATFQ9NY61 560 aaKnown RBP eCLIP25.27■■□□□ 1.64
MSRB3-211ENST00000541897 ECM29Q5VYK3 1845 aa25.27■■□□□ 1.64
MSRB3-211ENST00000541897 NPM3O75607 178 aaKnown RBP25.26■■□□□ 1.63
MSRB3-211ENST00000541897 CHGBP05060 677 aa25.26■■□□□ 1.63
MSRB3-211ENST00000541897 CHMLP26374 656 aa25.26■■□□□ 1.63
MSRB3-211ENST00000541897 PUS7LQ9H0K6 701 aaKnown RBP25.26■■□□□ 1.63
MSRB3-211ENST00000541897 USP40Q9NVE5 1235 aa25.26■■□□□ 1.63
MSRB3-211ENST00000541897 ZNF70Q9UC06 446 aaPredicted RBP25.26■■□□□ 1.63
MSRB3-211ENST00000541897 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
MSRB3-211ENST00000541897 SLFNL1Q499Z3 407 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 CST9Q5W186 159 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 MIGA1Q8NAN2 632 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 AIDAQ96BJ3 306 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 IDI2Q9BXS1 227 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 WBP1LQ9NX94 342 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 TMOD2Q9NZR1 351 aa25.25■■□□□ 1.63
MSRB3-211ENST00000541897 RAD50Q92878 1312 aa25.24■■□□□ 1.63
MSRB3-211ENST00000541897 NMIQ13287 307 aaPredicted RBP25.24■■□□□ 1.63
MSRB3-211ENST00000541897 MCMDC2Q4G0Z9 681 aa25.24■■□□□ 1.63
MSRB3-211ENST00000541897 APOBEC3FQ8IUX4 373 aaKnown RBP25.24■■□□□ 1.63
MSRB3-211ENST00000541897 RUFY2Q8WXA3 655 aa25.24■■□□□ 1.63
MSRB3-211ENST00000541897 FAM227BQ96M60 508 aa25.24■■□□□ 1.63
MSRB3-211ENST00000541897 POLR2AP24928 1970 aaKnown RBP25.24■■□□□ 1.63
MSRB3-211ENST00000541897 A0A0D9SFI3 127 aa25.23■■□□□ 1.63
MSRB3-211ENST00000541897 CDC45O75419 566 aa25.23■■□□□ 1.63
MSRB3-211ENST00000541897 DYNLL1P63167 89 aaKnown RBP25.23■■□□□ 1.63
MSRB3-211ENST00000541897 TNFAIP1Q13829 316 aa25.23■■□□□ 1.63
MSRB3-211ENST00000541897 SH3RF3Q8TEJ3 882 aaPredicted RBP25.23■■□□□ 1.63
MSRB3-211ENST00000541897 GPAA1O43292 621 aa25.22■■□□□ 1.63
MSRB3-211ENST00000541897 MBD4O95243 580 aa25.22■■□□□ 1.63
MSRB3-211ENST00000541897 GNAT2P19087 354 aa25.22■■□□□ 1.63
MSRB3-211ENST00000541897 CTCFP49711 727 aaPredicted RBP25.22■■□□□ 1.63
MSRB3-211ENST00000541897 MFAP1P55081 439 aaKnown RBP25.22■■□□□ 1.63
MSRB3-211ENST00000541897 ANGEL2Q5VTE6 544 aaKnown RBP25.22■■□□□ 1.63
MSRB3-211ENST00000541897 PAXIP1Q6ZW49 1069 aaPredicted RBP25.22■■□□□ 1.63
MSRB3-211ENST00000541897 FAM83AQ86UY5 434 aa25.22■■□□□ 1.63
MSRB3-211ENST00000541897 LCORLQ8N3X6 602 aa25.22■■□□□ 1.63
MSRB3-211ENST00000541897 STRBPQ96SI9 672 aaKnown RBP25.22■■□□□ 1.63
MSRB3-211ENST00000541897 CRNKL1Q9BZJ0 848 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms