RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SLFN5Q08AF3 891 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 BACH1O14867 736 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 DENND2CQ68D51 928 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 LCA5Q86VQ0 697 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-210ENST00000541363 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
HMGA2-210ENST00000541363 SYF2O95926 243 aaKnown RBP17.12■□□□□ 0.33
HMGA2-210ENST00000541363 EVCP57679 992 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 CCDC93Q567U6 631 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 GNA11P29992 359 aa17.12■□□□□ 0.33
HMGA2-210ENST00000541363 XRCC6P12956 609 aaKnown RBP eCLIP17.11■□□□□ 0.33
HMGA2-210ENST00000541363 CYP7A1P22680 504 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 RFC4P35249 363 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 KIF11P52732 1056 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 TROVE2P10155 538 aaKnown RBP eCLIP17.11■□□□□ 0.336e-8■□□□□ 8.5
HMGA2-210ENST00000541363 TRIM56Q9BRZ2 755 aaKnown RBP17.11■□□□□ 0.33
HMGA2-210ENST00000541363 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 SPTLC2O15270 562 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
HMGA2-210ENST00000541363 KRT15P19012 456 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 TYRO3Q06418 890 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 IFNKQ9P0W0 207 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 MTMR3Q13615 1198 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
HMGA2-210ENST00000541363 CABS1Q96KC9 395 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 ARHGAP42A6NI28 874 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 GCKP35557 465 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 Q6ZUG5 572 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 SPDL1Q96EA4 605 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 STRN3Q13033 797 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 PICALMQ13492 652 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
HMGA2-210ENST00000541363 PARP2Q9UGN5 583 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
HMGA2-210ENST00000541363 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 DACT1Q9NYF0 836 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 CTNND2Q9UQB3 1225 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 ZKSCAN5Q9Y2L8 839 aa17.1■□□□□ 0.33
HMGA2-210ENST00000541363 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 STX17P56962 302 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 ANKLE2Q86XL3 938 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 P3H4Q92791 437 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 APOEP02649 317 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 TPX2Q9ULW0 747 aaKnown RBP17.09■□□□□ 0.33
HMGA2-210ENST00000541363 CLCN1P35523 988 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 ORC6Q9Y5N6 252 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 SPC25Q9HBM1 224 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 ARHGAP4P98171 946 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 TRIM4Q9C037 500 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 MAP2K2P36507 400 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 TTLL3Q9Y4R7 772 aa17.09■□□□□ 0.33
HMGA2-210ENST00000541363 LUC7L3O95232 432 aaKnown RBP17.08■□□□□ 0.33
HMGA2-210ENST00000541363 SYCE1Q8N0S2 351 aa17.08■□□□□ 0.33
HMGA2-210ENST00000541363 PFDN1O60925 122 aa17.08■□□□□ 0.32
HMGA2-210ENST00000541363 EXOC7Q9UPT5 735 aa17.08■□□□□ 0.32
HMGA2-210ENST00000541363 BAG2O95816 211 aa17.08■□□□□ 0.32
HMGA2-210ENST00000541363 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.32
HMGA2-210ENST00000541363 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
HMGA2-210ENST00000541363 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
HMGA2-210ENST00000541363 RNF40O75150 1001 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
HMGA2-210ENST00000541363 TNNI2P48788 182 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
HMGA2-210ENST00000541363 F6X3S4 739 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 BRF1Q92994 677 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 LPXNO60711 386 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 LRGUKQ96M69 825 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 MAGEB6P1A0A0J9YX57 407 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 TRAF5O00463 557 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 GNAT2P19087 354 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 PHBP35232 272 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 TMTC4Q5T4D3 741 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 FAM71BQ8TC56 605 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
HMGA2-210ENST00000541363 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
HMGA2-210ENST00000541363 RNASE9P60153 205 aaKnown RBP17.07■□□□□ 0.32
HMGA2-210ENST00000541363 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 MAIP1Q8WWC4 291 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 BAIAP2L1Q9UHR4 511 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
HMGA2-210ENST00000541363 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
HMGA2-210ENST00000541363 NOD1Q9Y239 953 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms