RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 CLTCL1P53675 1640 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 F8VZ95 297 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 SLC27A2O14975 620 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 PPP2R3AQ06190 1150 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 ACCSLQ4AC99 568 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 SARM1Q6SZW1 724 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 RASEFQ8IZ41 740 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 MRPL50Q8N5N7 158 aaKnown RBP8.41□□□□□ -1.06
PPME1-206ENST00000541340 BCAS4Q8TDM0 211 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 SLC40A1Q9NP59 571 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 CORO1CQ9ULV4 474 aaPredicted RBP8.41□□□□□ -1.06
PPME1-206ENST00000541340 ABCC11Q96J66 1382 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 SYNRGQ9UMZ2 1314 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 GJB2P29033 226 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 USP5P45974 858 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 FOXD4Q12950 439 aaPredicted RBP8.41□□□□□ -1.06
PPME1-206ENST00000541340 CFAP70Q5T0N1 1121 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 FAM81BQ96LP2 452 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 NACA2Q9H009 215 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 EHD4Q9H223 541 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 KAT14Q9H8E8 782 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 STAG3Q9UJ98 1225 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 TRPC6Q9Y210 931 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 TROQ12816 1431 aaPredicted RBP8.41□□□□□ -1.06
PPME1-206ENST00000541340 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 MEFVO15553 781 aaPredicted RBP8.41□□□□□ -1.06
PPME1-206ENST00000541340 KIF4AO95239 1232 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 GNAT1P11488 350 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 FBLN1P23142 703 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 IRAK1P51617 712 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 ST3GAL1Q11201 340 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 CASP8Q14790 479 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 ARMCX5Q6P1M9 558 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 SCLT1Q96NL6 688 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 VCPKMTQ9H867 229 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 PREX2Q70Z35 1606 aa8.41□□□□□ -1.06
PPME1-206ENST00000541340 CEP152O94986 1710 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 CDHR2Q9BYE9 1310 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 KIAA0754O94854 1291 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 LINGO3P0C6S8 592 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 FERP16591 822 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 INHBCP55103 352 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 G3BP1Q13283 466 aaKnown RBP eCLIP8.4□□□□□ -1.061e-6■■■■■ 27.3
PPME1-206ENST00000541340 SYCP3Q8IZU3 236 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 GOLGA1Q92805 767 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 SLC35B4Q969S0 331 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 ZNF510Q9Y2H8 683 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 FRMD4BQ9Y2L6 1034 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 VAMP4O75379 141 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 SYF2O95926 243 aaKnown RBP8.4□□□□□ -1.06
PPME1-206ENST00000541340 RPL13P26373 211 aaKnown RBP8.4□□□□□ -1.06
PPME1-206ENST00000541340 PDE1AP54750 535 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 HSP90AB2PQ58FF8 381 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 ARHGAP45Q92619 1136 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 ABCB6Q9NP58 842 aa8.4□□□□□ -1.06
PPME1-206ENST00000541340 ERVK-7P63135 1459 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 NBPF7P0C2Y1 421 aaPredicted RBP8.4□□□□□ -1.07
PPME1-206ENST00000541340 VCAM1P19320 739 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 CDC25CP30307 473 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 GNPTABQ3T906 1256 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.07
PPME1-206ENST00000541340 CCDC13Q8IYE1 715 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 TRIM58Q8NG06 486 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 TEKT1Q969V4 418 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 ANKZF1Q9H8Y5 726 aa8.4□□□□□ -1.07
PPME1-206ENST00000541340 E2F6O75461 281 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 CSB-PGBD3P0DP91 1061 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 SLC8A1P32418 973 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 KCNJ6P48051 423 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 PKN1Q16512 942 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 PRPF40BQ6NWY9 871 aaKnown RBP8.39□□□□□ -1.07
PPME1-206ENST00000541340 CCDC50Q8IVM0 306 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 FAM114A1Q8IWE2 563 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
PPME1-206ENST00000541340 CXorf38Q8TB03 319 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 UBA5Q9GZZ9 404 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 TPX2Q9ULW0 747 aaKnown RBP8.39□□□□□ -1.07
PPME1-206ENST00000541340 B4DLN1 442 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 ARHGAP25P42331 645 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 CEBPZQ03701 1054 aaKnown RBP8.39□□□□□ -1.07
PPME1-206ENST00000541340 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 GALNT17Q6IS24 598 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 CYB5D1Q6P9G0 228 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 IGSF22Q8N9C0 903 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 NEK9Q8TD19 979 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 NSMCE1Q8WV22 266 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 SPAG5Q96R06 1193 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 PNKPQ96T60 521 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 TSC22D3Q99576 134 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 MEIS3Q99687 375 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 MYO1AQ9UBC5 1043 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 RAB21Q9UL25 225 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 GRIN2DO15399 1336 aa8.39□□□□□ -1.07
PPME1-206ENST00000541340 YTHDC2Q9H6S0 1430 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms