RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ADD2P35612 726 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 DMTNQ08495 405 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 E4F1Q66K89 784 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 ZNF512BQ96KM6 892 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 GOLGA6L19H0YKK7 550 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 NEMFO60524 1076 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 SKILP12757 684 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 NTRK3Q16288 839 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 IMMTQ16891 758 aaKnown RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 TTC39AQ5SRH9 613 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 C8orf76Q96K31 380 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 BTG4Q9NY30 223 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-212ENST00000541284 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
CNOT4-212ENST00000541284 DUOX1Q9NRD9 1551 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 SPTLC2O15270 562 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CDC27P30260 824 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CBX1P83916 185 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CHAF1AQ13111 956 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 KCNG4Q8TDN1 519 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 SH2B2O14492 632 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 PFKFB1P16118 471 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CEP135Q66GS9 1140 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 FNBP4Q8N3X1 1017 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 ZMYM6O95789 1325 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 RANBP6O60518 1105 aaKnown RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 ZNF202O95125 648 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 HLFQ16534 295 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CCDC57Q2TAC2 916 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 UTP14CQ5TAP6 766 aaKnown RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 ANO1Q5XXA6 986 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 ZNF34Q8IZ26 560 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-212ENST00000541284 FAM53CQ9NYF3 392 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
CNOT4-212ENST00000541284 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 IRS2Q9Y4H2 1338 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 CMA1P23946 247 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
CNOT4-212ENST00000541284 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 NCOA7Q8NI08 942 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
CNOT4-212ENST00000541284 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
CNOT4-212ENST00000541284 NID2Q14112 1375 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 FANCGO15287 622 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 NLRP12P59046 1061 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
CNOT4-212ENST00000541284 GREM2Q9H772 168 aa11.09□□□□□ -0.63
CNOT4-212ENST00000541284 NAP1L2Q9ULW6 460 aaPredicted RBP11.09□□□□□ -0.63
CNOT4-212ENST00000541284 WASHC4Q2M389 1173 aa11.08□□□□□ -0.63
CNOT4-212ENST00000541284 FILIP1Q7Z7B0 1213 aa11.08□□□□□ -0.63
CNOT4-212ENST00000541284 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.63
CNOT4-212ENST00000541284 IGDCC4Q8TDY8 1250 aa11.08□□□□□ -0.63
CNOT4-212ENST00000541284 IMPACTQ9P2X3 320 aa11.08□□□□□ -0.63
CNOT4-212ENST00000541284 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
CNOT4-212ENST00000541284 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
CNOT4-212ENST00000541284 ERVV-1B6SEH8 477 aa11.08□□□□□ -0.64
CNOT4-212ENST00000541284 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-212ENST00000541284 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
CNOT4-212ENST00000541284 EIF5P55010 431 aaKnown RBP11.08□□□□□ -0.64
CNOT4-212ENST00000541284 STK38Q15208 465 aa11.08□□□□□ -0.64
CNOT4-212ENST00000541284 NLRP10Q86W26 655 aa11.08□□□□□ -0.64
CNOT4-212ENST00000541284 MARCH10Q8NA82 808 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-212ENST00000541284 EPB41L4AQ9HCS5 686 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-212ENST00000541284 ZNF215Q9UL58 517 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-212ENST00000541284 ARID4AP29374 1257 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 KCNJ6P48051 423 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 APOA5Q6Q788 366 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 FOXP4Q8IVH2 680 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 LY9Q9HBG7 655 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 COL1A1P02452 1464 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 BECN2A8MW95 431 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 FGFR2P21802 821 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 BMP6P22004 513 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 LRRN4CLQ8ND94 238 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 DPF2Q92785 391 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 TIGD1Q96MW7 591 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 INCENPQ9NQS7 918 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 IFNKQ9P0W0 207 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 ZNF213O14771 459 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 ATP1A3P13637 1013 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms