RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 MTX1Q13505 466 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 RASGRF1Q13972 1273 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
MSRB3-209ENST00000540804 FAM83AQ86UY5 434 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 ZFPM1Q8IX07 1006 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 XAGE2Q96GT9 111 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 WRNIP1Q96S55 665 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
MSRB3-209ENST00000540804 DENND2AQ9ULE3 1009 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 USP40Q9NVE5 1235 aa17.96■□□□□ 0.47
MSRB3-209ENST00000540804 FAM198AQ9UFP1 575 aa17.96■□□□□ 0.47
MSRB3-209ENST00000540804 CSADQ9Y600 493 aa17.96■□□□□ 0.47
MSRB3-209ENST00000540804 CCL15-CCL14A0A0B4J2E2 113 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 GNAI2P04899 355 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 SLURP2P0DP57 97 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 INPP5BP32019 993 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 CCL15Q16663 113 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 FKBP1CQ5VVH2 108 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 CD99L2Q8TCZ2 262 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 FAM151AQ8WW52 585 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 NEUROD6Q96NK8 337 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 TRIM17Q9Y577 477 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 SALL1Q9NSC2 1324 aa17.95■□□□□ 0.46
MSRB3-209ENST00000540804 PKN2Q16513 984 aaKnown RBP17.94■□□□□ 0.46
MSRB3-209ENST00000540804 FBXO46Q6PJ61 603 aaPredicted RBP17.94■□□□□ 0.46
MSRB3-209ENST00000540804 PI16Q6UXB8 463 aa17.94■□□□□ 0.46
MSRB3-209ENST00000540804 C1orf115Q9H7X2 142 aa17.94■□□□□ 0.46
MSRB3-209ENST00000540804 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
MSRB3-209ENST00000540804 SPDYE5A6NIY4 337 aa17.93■□□□□ 0.46
MSRB3-209ENST00000540804 SEMA3EO15041 775 aa17.93■□□□□ 0.46
MSRB3-209ENST00000540804 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
MSRB3-209ENST00000540804 OTUD7BQ6GQQ9 843 aa17.93■□□□□ 0.46
MSRB3-209ENST00000540804 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
MSRB3-209ENST00000540804 IRF6O14896 467 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 GTF2A2P52657 109 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 TBC1D9Q6ZT07 1266 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 ZNF384Q8TF68 577 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 ZNF341Q9BYN7 854 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 HMG20BQ9P0W2 317 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 AKAP2Q9Y2D5 859 aa17.92■□□□□ 0.46
MSRB3-209ENST00000540804 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
MSRB3-209ENST00000540804 RLBP1P12271 317 aa17.91■□□□□ 0.46
MSRB3-209ENST00000540804 DCAF15Q66K64 600 aa17.91■□□□□ 0.46
MSRB3-209ENST00000540804 SH3BP5LQ7L8J4 393 aa17.91■□□□□ 0.46
MSRB3-209ENST00000540804 DZIP1Q86YF9 867 aaKnown RBP17.91■□□□□ 0.46
MSRB3-209ENST00000540804 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
MSRB3-209ENST00000540804 LAMB1P07942 1786 aa17.9■□□□□ 0.46
MSRB3-209ENST00000540804 RGS3P49796 1198 aa17.9■□□□□ 0.46
MSRB3-209ENST00000540804 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
MSRB3-209ENST00000540804 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
MSRB3-209ENST00000540804 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
MSRB3-209ENST00000540804 ERO1BQ86YB8 467 aa17.9■□□□□ 0.46
MSRB3-209ENST00000540804 DDX4Q9NQI0 724 aaKnown RBP17.9■□□□□ 0.46
MSRB3-209ENST00000540804 GAKO14976 1311 aa17.9■□□□□ 0.46
MSRB3-209ENST00000540804 BTBD19C9JJ37 291 aa17.89■□□□□ 0.45
MSRB3-209ENST00000540804 ECM2O94769 699 aaPredicted RBP17.89■□□□□ 0.45
MSRB3-209ENST00000540804 BTDP43251 543 aa17.89■□□□□ 0.45
MSRB3-209ENST00000540804 SP3Q02447 781 aa17.89■□□□□ 0.45
MSRB3-209ENST00000540804 MECOMQ03112 1051 aa17.89■□□□□ 0.45
MSRB3-209ENST00000540804 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
MSRB3-209ENST00000540804 HOOK2Q96ED9 719 aa17.89■□□□□ 0.45
MSRB3-209ENST00000540804 ZNF112Q9UJU3 913 aa17.89■□□□□ 0.45
MSRB3-209ENST00000540804 TNRC18O15417 2968 aaPredicted RBP17.88■□□□□ 0.45
MSRB3-209ENST00000540804 DDTLA6NHG4 134 aaPredicted RBP17.88■□□□□ 0.45
MSRB3-209ENST00000540804 WDHD1O75717 1129 aaPredicted RBP17.88■□□□□ 0.45
MSRB3-209ENST00000540804 PPIL2Q13356 520 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 PICALMQ13492 652 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 POLA2Q14181 598 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 ZGPATQ8N5A5 531 aaKnown RBP17.88■□□□□ 0.45
MSRB3-209ENST00000540804 ERO1AQ96HE7 468 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 ATRNL1Q5VV63 1379 aa17.88■□□□□ 0.45
MSRB3-209ENST00000540804 ZBTB22O15209 634 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 CETPP11597 493 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 MCAMP43121 646 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 SNAPC2Q13487 334 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 SPATA5Q8NB90 893 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 IDI2Q9BXS1 227 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 EFCC1Q9HA90 598 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 SNRKQ9NRH2 765 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 PTPN22Q9Y2R2 807 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 MROH7-TTC4A0A0A0MT08 1334 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 PDS5AQ29RF7 1337 aaKnown RBP17.87■□□□□ 0.45
MSRB3-209ENST00000540804 RFX7Q2KHR2 1363 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 HTTP42858 3142 aa17.87■□□□□ 0.45
MSRB3-209ENST00000540804 ARID4AP29374 1257 aaPredicted RBP17.86■□□□□ 0.45
MSRB3-209ENST00000540804 RHBDL3P58872 404 aa17.86■□□□□ 0.45
MSRB3-209ENST00000540804 PPATQ06203 517 aa17.86■□□□□ 0.45
MSRB3-209ENST00000540804 ZSCAN29Q8IWY8 852 aaPredicted RBP17.86■□□□□ 0.45
MSRB3-209ENST00000540804 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
MSRB3-209ENST00000540804 FAM163AQ96GL9 167 aaPredicted RBP17.86■□□□□ 0.45
MSRB3-209ENST00000540804 DBNDD2Q9BQY9 259 aa17.86■□□□□ 0.45
MSRB3-209ENST00000540804 ARHGAP39Q9C0H5 1083 aa17.86■□□□□ 0.45
MSRB3-209ENST00000540804 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms