RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 YEATS4O95619 227 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 CAVIN2O95810 425 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 SP4Q02446 784 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 TCP10L2B9ZVM9 353 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 DEXIO95424 95 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 BEND3Q5T5X7 828 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 BRAPQ7Z569 592 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 TRIM47Q96LD4 638 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 CRB1P82279 1406 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 ZSCAN22P10073 491 aaPredicted RBP16.18■□□□□ 0.18
COLCA1-204ENST00000540738 ASIC1P78348 528 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 TDRD12Q587J7 1177 aaKnown RBP16.18■□□□□ 0.18
COLCA1-204ENST00000540738 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 DTHD1Q6ZMT9 781 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 RUFY3Q7L099 469 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 TBC1D32Q96NH3 1257 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
COLCA1-204ENST00000540738 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 AZI2Q9H6S1 392 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 SPON1Q9HCB6 807 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
COLCA1-204ENST00000540738 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 ATP10DQ9P241 1426 aa16.18■□□□□ 0.18
COLCA1-204ENST00000540738 CIAO1O76071 339 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 PDE8BO95263 885 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 ERFEQ4G0M1 354 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 CIAPIN1Q6FI81 312 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 ALKQ9UM73 1620 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 TOP1P11387 765 aaKnown RBP16.17■□□□□ 0.18
COLCA1-204ENST00000540738 SFPQP23246 707 aaKnown RBP eCLIP16.17■□□□□ 0.18
COLCA1-204ENST00000540738 STX1AQ16623 288 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 GREM2Q9H772 168 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
COLCA1-204ENST00000540738 PRDM1O75626 825 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 SCNN1DP51172 638 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 FERMT1Q9BQL6 677 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
COLCA1-204ENST00000540738 CCNA1P78396 465 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 C1orf167Q5SNV9 1468 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 PSMA7O14818 248 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 USO1O60763 962 aaKnown RBP16.17■□□□□ 0.18
COLCA1-204ENST00000540738 ZBTB21Q9ULJ3 1066 aa16.17■□□□□ 0.18
COLCA1-204ENST00000540738 GRAPQ13588 217 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 MCTP2Q6DN12 878 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 GRAPLQ8TC17 118 aaPredicted RBP16.16■□□□□ 0.18
COLCA1-204ENST00000540738 TULP4Q9NRJ4 1543 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 NEFHP12036 1026 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 BTDP43251 543 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 TFAP4Q01664 338 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 KCNQ4P56696 695 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 GADL1Q6ZQY3 521 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 SPAG1Q07617 926 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 TXNRD1Q16881 649 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
COLCA1-204ENST00000540738 M0QZ92 97 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 NUP88Q99567 741 aaPredicted RBP16.15■□□□□ 0.18
COLCA1-204ENST00000540738 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
COLCA1-204ENST00000540738 BCAMP50895 628 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 UBE2HP62256 183 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 SEPT7Q16181 437 aaKnown RBP16.15■□□□□ 0.18
COLCA1-204ENST00000540738 CERKLQ49MI3 558 aaPredicted RBP16.15■□□□□ 0.18
COLCA1-204ENST00000540738 NLRP10Q86W26 655 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 SSH3Q8TE77 659 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 ADCY7P51828 1080 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 TAF12Q16514 161 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 MRPS27Q92552 414 aaKnown RBP16.15■□□□□ 0.18
COLCA1-204ENST00000540738 GPR108Q9NPR9 543 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 CCDC17Q96LX7 622 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 PAGR1Q9BTK6 254 aa16.15■□□□□ 0.18
COLCA1-204ENST00000540738 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
COLCA1-204ENST00000540738 COPRSQ9NQ92 184 aa16.14■□□□□ 0.18
COLCA1-204ENST00000540738 CLIP2Q9UDT6 1046 aa16.14■□□□□ 0.18
COLCA1-204ENST00000540738 PTCH1Q13635 1447 aa16.14■□□□□ 0.18
COLCA1-204ENST00000540738 GNPTABQ3T906 1256 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 SYCE3A1L190 88 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 MCM7P33993 719 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 CCDC129Q6ZRS4 1044 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 SYNCQ9H7C4 482 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 GOLGA6L10A6NI86 522 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 SMTNP53814 917 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 DSCC1Q9BVC3 393 aa16.14■□□□□ 0.17
COLCA1-204ENST00000540738 ZSCAN12O43309 604 aa16.13■□□□□ 0.17
COLCA1-204ENST00000540738 PPARAQ07869 468 aa16.13■□□□□ 0.17
COLCA1-204ENST00000540738 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
COLCA1-204ENST00000540738 CYP27B1O15528 508 aa16.13■□□□□ 0.17
COLCA1-204ENST00000540738 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
COLCA1-204ENST00000540738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms