RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 BICDL1Q6ZP65 573 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 AMIGO3Q86WK7 504 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 USP28Q96RU2 1077 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 ORC3Q9UBD5 711 aaPredicted RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 ZPR1O75312 459 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 CCDC192P0DO97 292 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 TM4SF1P30408 202 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 NTRK3Q16288 839 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 ADGRA1Q86SQ6 560 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 C8orf76Q96K31 380 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 RIOK1Q9BRS2 568 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 NACAP1Q9BZK3 213 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 KRT23Q9C075 422 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 RTEL1Q9NZ71 1219 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 NOL7Q9UMY1 257 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
LCOR-209ENST00000540664 SLC4A4Q9Y6R1 1079 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
LCOR-209ENST00000540664 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 NR1I2O75469 434 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 METAP2P50579 478 aaKnown RBP eCLIP11.16□□□□□ -0.62
LCOR-209ENST00000540664 CTDSPL2Q05D32 466 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 CAVIN4Q5BKX8 364 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 NBPF5PQ86XG9 351 aaPredicted RBP11.16□□□□□ -0.62
LCOR-209ENST00000540664 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
LCOR-209ENST00000540664 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 MAST2Q6P0Q8 1798 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 CPLX1O14810 134 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 CYP7A1P22680 504 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
LCOR-209ENST00000540664 FOSBP53539 338 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 GUCY1B3Q02153 619 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 BRAPQ7Z569 592 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 FTOQ9C0B1 505 aaKnown RBP eCLIP11.16□□□□□ -0.62
LCOR-209ENST00000540664 TNMDQ9H2S6 317 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 INCENPQ9NQS7 918 aa11.16□□□□□ -0.62
LCOR-209ENST00000540664 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
LCOR-209ENST00000540664 MYH13Q9UKX3 1938 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 KIAA1551Q9HCM1 1747 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 ZBTB43O43298 467 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 CDKL5O76039 1030 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 CDC27P30260 824 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 MFSD6Q6ZSS7 791 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 RAB11FIP4Q86YS3 637 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 BICD2Q8TD16 824 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
LCOR-209ENST00000540664 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 CCDC39Q9UFE4 941 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 MRVI1Q9Y6F6 885 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 STK36Q9NRP7 1315 aa11.15□□□□□ -0.62
LCOR-209ENST00000540664 KDM4AO75164 1064 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 TDO2P48775 406 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 RCAN1P53805 252 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.63
LCOR-209ENST00000540664 TYRO3Q06418 890 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 SNW1Q13573 536 aaKnown RBP11.15□□□□□ -0.63
LCOR-209ENST00000540664 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 ENGASEQ8NFI3 743 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.63
LCOR-209ENST00000540664 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.63
LCOR-209ENST00000540664 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 PPARAQ07869 468 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 CAMK4Q16566 473 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
LCOR-209ENST00000540664 FAM200AQ8TCP9 573 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
LCOR-209ENST00000540664 DUOX1Q9NRD9 1551 aa11.14□□□□□ -0.63
LCOR-209ENST00000540664 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 A0A1W2PQD8 194 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
LCOR-209ENST00000540664 YEATS4O95619 227 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 FGRP09769 529 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 KLRK1P26718 216 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
LCOR-209ENST00000540664 CPLX2Q6PUV4 134 aaKnown RBP11.13□□□□□ -0.63
LCOR-209ENST00000540664 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 GOLPH3LQ9H4A5 285 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 UBR3Q6ZT12 1888 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms