RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CCT4P50991 539 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 GNAI1P63096 354 aa11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 UBE2OQ9C0C9 1292 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 ZMYND8Q9ULU4 1186 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
TRAPPC1-202ENST00000540486 CLRN2A0PK11 232 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 PDE8AO60658 829 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 GTF2IP78347 998 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 SNAPC2Q13487 334 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 VGLL4Q14135 290 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 WDR63Q8IWG1 891 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 C7orf61Q8IZ16 206 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 PRMT6Q96LA8 375 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 DEFB118Q96PH6 123 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
TRAPPC1-202ENST00000540486 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 CFAP100Q494V2 611 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.32□□□□□ -0.66e-7■■■■□ 23.4
TRAPPC1-202ENST00000540486 PXYLP1Q8TE99 480 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 TSR2Q969E8 191 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 PAK6Q9NQU5 681 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 ADGRA2Q96PE1 1338 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 MUC3AQ02505 3323 aa11.32□□□□□ -0.6
TRAPPC1-202ENST00000540486 ADCY3O60266 1144 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 FCGRTP55899 365 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 PRKCZQ05513 592 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 TXNRD3Q86VQ6 643 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 MAFAQ8NHW3 353 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 IL16Q14005 1332 aa11.31□□□□□ -0.6
TRAPPC1-202ENST00000540486 IRF6O14896 467 aa11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 SYN1P17600 705 aa11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 ZNF697Q5TEC3 545 aa11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 ANKRD23Q86SG2 305 aa11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 RAPGEFL1Q9UHV5 662 aa11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
TRAPPC1-202ENST00000540486 INHAP05111 366 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 HOXB7P09629 217 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 PPIL2Q13356 520 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 FAM161BQ96MY7 647 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 TEPSINQ96N21 525 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 CDX2Q99626 313 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 CD209Q9NNX6 404 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
TRAPPC1-202ENST00000540486 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 PDHXO00330 501 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 IRF5Q13568 498 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 TJAP1Q5JTD0 557 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 ANKRD2Q9GZV1 360 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 GABRQQ9UN88 632 aa11.28□□□□□ -0.6
TRAPPC1-202ENST00000540486 PRUNE2Q8WUY3 3088 aa11.27□□□□□ -0.6
TRAPPC1-202ENST00000540486 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 VAMP4O75379 141 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 TNNI2P48788 182 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 FLT3LGP49771 235 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 PPATQ06203 517 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 EYSQ5T1H1 3165 aa11.27□□□□□ -0.61
TRAPPC1-202ENST00000540486 BCRP11274 1271 aa11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 ELNP15502 786 aa11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 EXOSC9Q06265 439 aaKnown RBP11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 CDCA7LQ96GN5 454 aa11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 SEMA6BQ9H3T3 888 aa11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
TRAPPC1-202ENST00000540486 TMEM265A0A087WTH1 108 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 CTSWP56202 376 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms