RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ALDH1A1P00352 501 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 PRDX5P30044 214 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 MAP3K9P80192 1104 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 TCP10Q12799 353 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
LMO3-222ENST00000540445 MVPQ14764 893 aaKnown RBP11.13□□□□□ -0.63
LMO3-222ENST00000540445 DIXDC1Q155Q3 683 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
LMO3-222ENST00000540445 FAM83AQ86UY5 434 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 HOOK2Q96ED9 719 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 CSADQ9Y600 493 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 CENPFP49454 3210 aa11.13□□□□□ -0.63
LMO3-222ENST00000540445 RPAP1Q9BWH6 1393 aaPredicted RBP11.13□□□□□ -0.63
LMO3-222ENST00000540445 RBBP6Q7Z6E9 1792 aaKnown RBP11.13□□□□□ -0.63
LMO3-222ENST00000540445 ATP8B2P98198 1209 aa11.12□□□□□ -0.63
LMO3-222ENST00000540445 MLLT1Q03111 559 aaPredicted RBP11.12□□□□□ -0.63
LMO3-222ENST00000540445 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
LMO3-222ENST00000540445 PKN2Q16513 984 aaKnown RBP11.12□□□□□ -0.63
LMO3-222ENST00000540445 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
LMO3-222ENST00000540445 CDC42EP5Q6NZY7 148 aa11.12□□□□□ -0.63
LMO3-222ENST00000540445 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
LMO3-222ENST00000540445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.12□□□□□ -0.63
LMO3-222ENST00000540445 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
LMO3-222ENST00000540445 C1orf115Q9H7X2 142 aa11.12□□□□□ -0.63
LMO3-222ENST00000540445 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
LMO3-222ENST00000540445 DAGLAQ9Y4D2 1042 aa11.12□□□□□ -0.63
LMO3-222ENST00000540445 MYO5AQ9Y4I1 1855 aaKnown RBP11.12□□□□□ -0.63
LMO3-222ENST00000540445 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 PTPRFP10586 1907 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
LMO3-222ENST00000540445 FKTNO75072 461 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
LMO3-222ENST00000540445 RASGRF1Q13972 1273 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 PPP4R3CPQ6ZMV5 832 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 PTPN18Q99952 460 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
LMO3-222ENST00000540445 PHIPQ8WWQ0 1821 aa11.11□□□□□ -0.63
LMO3-222ENST00000540445 PDE4DIPQ5VU43 2346 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 ZSWIM8A7E2V4 1837 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 RLBP1P12271 317 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 VGLL4Q14135 290 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 FBXO46Q6PJ61 603 aaPredicted RBP11.1□□□□□ -0.63
LMO3-222ENST00000540445 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
LMO3-222ENST00000540445 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 MS4A1P11836 297 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 POLA2Q14181 598 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
LMO3-222ENST00000540445 SPATA5Q8NB90 893 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 SSH3Q8TE77 659 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
LMO3-222ENST00000540445 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 SNCAIPQ9Y6H5 919 aa11.09□□□□□ -0.63
LMO3-222ENST00000540445 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
LMO3-222ENST00000540445 DOCK1Q14185 1865 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 RFX7Q2KHR2 1363 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 FOCADQ5VW36 1801 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 ATAD5Q96QE3 1844 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 LDHCP07864 332 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 GTF2A2P52657 109 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 SOX10P56693 466 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 MECOMQ03112 1051 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 NFIAQ12857 509 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 CRHR2Q13324 411 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 TTC39AQ5SRH9 613 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 LRP2BPQ9P2M1 347 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 MGAMO43451 1857 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 GAKO14976 1311 aa11.08□□□□□ -0.64
LMO3-222ENST00000540445 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 BTDP43251 543 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 GSTO1P78417 241 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 CAP1Q01518 475 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 PICALMQ13492 652 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 CCL15Q16663 113 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 TNNI3KQ59H18 835 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 PI16Q6UXB8 463 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 OTOP1Q7RTM1 612 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 ZFPM1Q8IX07 1006 aa11.07□□□□□ -0.64
LMO3-222ENST00000540445 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
LMO3-222ENST00000540445 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms