RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 FAM83AQ86UY5 434 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 KLRG1Q96E93 195 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
PRPF19-204ENST00000539960 HAUS7Q99871 368 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
PRPF19-204ENST00000539960 MROH7-TTC4A0A0A0MT08 1334 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 CEP350Q5VT06 3117 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 BTDP43251 543 aa16.34■□□□□ 0.21
PRPF19-204ENST00000539960 FKBP1BP68106 108 aa16.34■□□□□ 0.21
PRPF19-204ENST00000539960 MAP3K12Q12852 859 aa16.34■□□□□ 0.21
PRPF19-204ENST00000539960 NBPF12Q5TAG4 269 aaPredicted RBP16.34■□□□□ 0.21
PRPF19-204ENST00000539960 GPATCH3Q96I76 525 aa16.34■□□□□ 0.21
PRPF19-204ENST00000539960 HHIPL1Q96JK4 782 aa16.34■□□□□ 0.21
PRPF19-204ENST00000539960 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.21
PRPF19-204ENST00000539960 GOLIM4O00461 696 aa16.33■□□□□ 0.2
PRPF19-204ENST00000539960 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
PRPF19-204ENST00000539960 HUNKP57058 714 aa16.33■□□□□ 0.2
PRPF19-204ENST00000539960 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
PRPF19-204ENST00000539960 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
PRPF19-204ENST00000539960 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
PRPF19-204ENST00000539960 PAG1Q9NWQ8 432 aa16.33■□□□□ 0.2
PRPF19-204ENST00000539960 CNTNAP1P78357 1384 aa16.33■□□□□ 0.2
PRPF19-204ENST00000539960 CYP7A1P22680 504 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 RHBDL3P58872 404 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 PPP4CP60510 307 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 NFIAQ12857 509 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
PRPF19-204ENST00000539960 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 MAGEB6Q8N7X4 407 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 OTUD7AQ8TE49 926 aaPredicted RBP16.32■□□□□ 0.2
PRPF19-204ENST00000539960 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
PRPF19-204ENST00000539960 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
PRPF19-204ENST00000539960 IDI2Q9BXS1 227 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
PRPF19-204ENST00000539960 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 TTC41PQ6P2S7 1318 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 UBE2Q2LH0YL09 131 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 PPP1R12BO60237 982 aaPredicted RBP16.31■□□□□ 0.2
PRPF19-204ENST00000539960 BAG3O95817 575 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 VEGFBP49765 207 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 TCP10Q12799 353 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 MOB2Q70IA6 237 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
PRPF19-204ENST00000539960 ERC2O15083 957 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 ENTPD3O75355 529 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
PRPF19-204ENST00000539960 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
PRPF19-204ENST00000539960 PLCG2P16885 1265 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 MX1P20591 662 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 RGS3P49796 1198 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 NUCB1Q02818 461 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 PRKG1Q13976 671 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 ZFPM1Q8IX07 1006 aa16.3■□□□□ 0.2
PRPF19-204ENST00000539960 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF19-204ENST00000539960 SALL3Q9BXA9 1300 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
PRPF19-204ENST00000539960 PDE6AP16499 860 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 ECE1P42892 770 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 MAP3K11Q16584 847 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 LDLRAD1Q5T700 205 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 CYP4F22Q6NT55 531 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 PAXIP1Q6ZW49 1069 aaPredicted RBP16.29■□□□□ 0.2
PRPF19-204ENST00000539960 CHD1LQ86WJ1 897 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 CAPNS2Q96L46 248 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
PRPF19-204ENST00000539960 ANGEL1Q9UNK9 670 aaKnown RBP16.29■□□□□ 0.2
PRPF19-204ENST00000539960 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
PRPF19-204ENST00000539960 MYH2Q9UKX2 1941 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 GLRX3O76003 335 aaKnown RBP16.28■□□□□ 0.2
PRPF19-204ENST00000539960 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
PRPF19-204ENST00000539960 JMYQ8N9B5 988 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 SH3RF3Q8TEJ3 882 aaPredicted RBP16.28■□□□□ 0.2
PRPF19-204ENST00000539960 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 HOOK2Q96ED9 719 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRPF19-204ENST00000539960 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
PRPF19-204ENST00000539960 FZD1Q9UP38 647 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 ECM29Q5VYK3 1845 aa16.28■□□□□ 0.2
PRPF19-204ENST00000539960 TCRBV5S4A2TA0A5A2 114 aa16.27■□□□□ 0.2
PRPF19-204ENST00000539960 ZNF157P51786 506 aaPredicted RBP16.27■□□□□ 0.2
PRPF19-204ENST00000539960 PDE1AP54750 535 aa16.27■□□□□ 0.2
PRPF19-204ENST00000539960 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
PRPF19-204ENST00000539960 CERS3Q8IU89 383 aa16.27■□□□□ 0.2
PRPF19-204ENST00000539960 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
PRPF19-204ENST00000539960 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
PRPF19-204ENST00000539960 ZNF532Q9HCE3 1301 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 UNCXA6NJT0 531 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 ADD2P35612 726 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 IREB2P48200 963 aaKnown RBP16.26■□□□□ 0.19
PRPF19-204ENST00000539960 GRM1Q13255 1194 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 PICALMQ13492 652 aa16.26■□□□□ 0.19
PRPF19-204ENST00000539960 KBTBD3Q8NAB2 608 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms