RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CNTROBQ8N137 903 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 PDCL2Q8N4E4 241 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
CCDC60-204ENST00000539847 JDP2Q8WYK2 163 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 FEZ1Q99689 392 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 NYXQ9GZU5 481 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 VPS33BQ9H267 617 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 ZNF277Q9NRM2 450 aaPredicted RBP9.11□□□□□ -0.95
CCDC60-204ENST00000539847 STAP2Q9UGK3 403 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 NIP7Q9Y221 180 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC60-204ENST00000539847 USTQ9Y2C2 406 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 USP16Q9Y5T5 823 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 SNED1Q8TER0 1413 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 ADAMTSL1Q8N6G6 1762 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 ZNF541Q9H0D2 1346 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 CHL1O00533 1208 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 PTMAP06454 111 aaKnown RBP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 MX1P20591 662 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 DEFB115Q30KQ5 88 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 CCDC24Q8N4L8 307 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 ZGPATQ8N5A5 531 aaKnown RBP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 HLA-CQ95604 372 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 PHACTR3Q96KR7 559 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 KIF3AQ9Y496 699 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 ATP6V1DQ9Y5K8 247 aa9.1□□□□□ -0.95
CCDC60-204ENST00000539847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCDC60-204ENST00000539847 KCNQ3O43525 872 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 ZSCAN20P17040 1043 aaPredicted RBP9.09□□□□□ -0.95
CCDC60-204ENST00000539847 ECE1P42892 770 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 CCT4P50991 539 aaKnown RBP9.09□□□□□ -0.95
CCDC60-204ENST00000539847 PDE1AP54750 535 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 EIF6P56537 245 aaKnown RBP9.09□□□□□ -0.95
CCDC60-204ENST00000539847 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
CCDC60-204ENST00000539847 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 C8orf58Q8NAV2 365 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 ESYT1Q9BSJ8 1104 aa9.09□□□□□ -0.95
CCDC60-204ENST00000539847 SEPT9Q9UHD8 586 aaPredicted RBP9.09□□□□□ -0.95
CCDC60-204ENST00000539847 SALL3Q9BXA9 1300 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 GOLGA6L6A8MZA4 724 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 CTIFO43310 598 aaKnown RBP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 HOXA2O43364 376 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 CA12O43570 354 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 HSPA8P11142 646 aaKnown RBP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 NEK4P51957 841 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 LBX1P52954 281 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 UBE2HP62256 183 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 PKP1Q13835 747 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 TAF7Q15545 349 aaPredicted RBP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 USP50Q70EL3 339 aaPredicted RBP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 CRAMP1Q96RY5 1269 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 DDX21Q9NR30 783 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC60-204ENST00000539847 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
CCDC60-204ENST00000539847 CDHR2Q9BYE9 1310 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 FDX1P10109 184 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
CCDC60-204ENST00000539847 MAP2K2P36507 400 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 CHAF1AQ13111 956 aaPredicted RBP9.07□□□□□ -0.96
CCDC60-204ENST00000539847 MAP1SQ66K74 1059 aaPredicted RBP9.07□□□□□ -0.96
CCDC60-204ENST00000539847 KIAA1524Q8TCG1 905 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 ANKRD7Q92527 254 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 ABHD8Q96I13 439 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 HHIPL1Q96JK4 782 aa9.07□□□□□ -0.96
CCDC60-204ENST00000539847 THSD7BQ9C0I4 1608 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 RGS19P49795 217 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 SCNN1DP51172 638 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 PRPF38BQ5VTL8 546 aaKnown RBP9.06□□□□□ -0.96
CCDC60-204ENST00000539847 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 USP48Q86UV5 1035 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 CREBRFQ8IUR6 639 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 RPGRQ92834 1020 aaKnown RBP9.06□□□□□ -0.96
CCDC60-204ENST00000539847 OTUD5Q96G74 571 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 ABT1Q9ULW3 272 aaKnown RBP9.06□□□□□ -0.96
CCDC60-204ENST00000539847 NSFL1CQ9UNZ2 370 aaKnown RBP9.06□□□□□ -0.96
CCDC60-204ENST00000539847 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.06□□□□□ -0.96
CCDC60-204ENST00000539847 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
CCDC60-204ENST00000539847 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.05□□□□□ -0.96
CCDC60-204ENST00000539847 PRAMEF22A3QJZ6 481 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 ADCY5O95622 1261 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 CAVIN2O95810 425 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 GNAI3P08754 354 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 CHMLP26374 656 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 USP46P62068 366 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 HLFQ16534 295 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 DNTTIP2Q5QJE6 756 aaKnown RBP9.05□□□□□ -0.96
CCDC60-204ENST00000539847 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 MCM10Q7L590 875 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 LARGE2Q8N3Y3 721 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms