RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 SCNN1DP51172 638 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 PPP4CP60510 307 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 ALX1Q15699 326 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 IMMTQ16891 758 aaKnown RBP19.26■□□□□ 0.67
TRAF3-204ENST00000539721 RSBN1LQ6PCB5 846 aaPredicted RBP19.26■□□□□ 0.67
TRAF3-204ENST00000539721 CERS3Q8IU89 383 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 SDR42E1Q8WUS8 393 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 NAPBQ9H115 298 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 EPB41L4AQ9HCS5 686 aaPredicted RBP19.26■□□□□ 0.67
TRAF3-204ENST00000539721 DAGLAQ9Y4D2 1042 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 ZMYM6O95789 1325 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 MYO3BQ8WXR4 1341 aa19.26■□□□□ 0.67
TRAF3-204ENST00000539721 GPR75-ASB3A0A0A6YYF3 556 aa19.25■□□□□ 0.67
TRAF3-204ENST00000539721 VIL1P09327 827 aaKnown RBP19.25■□□□□ 0.67
TRAF3-204ENST00000539721 TDO2P48775 406 aa19.25■□□□□ 0.67
TRAF3-204ENST00000539721 CDK5RAP2Q96SN8 1893 aa19.25■□□□□ 0.67
TRAF3-204ENST00000539721 BAZ2AQ9UIF9 1905 aaKnown RBP19.24■□□□□ 0.67
TRAF3-204ENST00000539721 DICER1Q9UPY3 1922 aaKnown RBP19.24■□□□□ 0.67
TRAF3-204ENST00000539721 PRELPP51888 382 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 SH3RF3Q8TEJ3 882 aaPredicted RBP19.24■□□□□ 0.67
TRAF3-204ENST00000539721 TEKT1Q969V4 418 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 CXCL9Q07325 125 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 KRT32Q14532 448 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 TSGA10IPQ3SY00 556 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 CIAPIN1Q6FI81 312 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 HHIPL2Q6UWX4 724 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 JAKMIP1Q96N16 626 aaKnown RBP19.24■□□□□ 0.67
TRAF3-204ENST00000539721 TAF6LQ9Y6J9 622 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 SBF1O95248 1867 aa19.24■□□□□ 0.67
TRAF3-204ENST00000539721 NAV1Q8NEY1 1877 aa19.23■□□□□ 0.67
TRAF3-204ENST00000539721 ZNF213O14771 459 aa19.23■□□□□ 0.67
TRAF3-204ENST00000539721 PLCG2P16885 1265 aa19.23■□□□□ 0.67
TRAF3-204ENST00000539721 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRAF3-204ENST00000539721 CRKP46108 304 aa19.23■□□□□ 0.67
TRAF3-204ENST00000539721 HAND2P61296 217 aa19.23■□□□□ 0.67
TRAF3-204ENST00000539721 ADCK5Q3MIX3 580 aa19.23■□□□□ 0.67
TRAF3-204ENST00000539721 PSMA5P28066 241 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 USP5P45974 858 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 HDLBPQ00341 1268 aaKnown RBP19.22■□□□□ 0.67
TRAF3-204ENST00000539721 GIMAP6Q6P9H5 292 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 MRIQ9BWK5 157 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 ATP8A2Q9NTI2 1148 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 ECM29Q5VYK3 1845 aa19.22■□□□□ 0.67
TRAF3-204ENST00000539721 CASTP20810 708 aaKnown RBP19.21■□□□□ 0.67
TRAF3-204ENST00000539721 NEK4P51957 841 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 TNIP1Q15025 636 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 TEX11Q8IYF3 940 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
TRAF3-204ENST00000539721 UPF3BQ9BZI7 483 aaKnown RBP19.21■□□□□ 0.67
TRAF3-204ENST00000539721 TM6SF1Q9BZW5 370 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 LAMB1P07942 1786 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 ST18O60284 1047 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 LMNB1P20700 586 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 RBM5P52756 815 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRAF3-204ENST00000539721 EIF6P56537 245 aaKnown RBP19.21■□□□□ 0.67
TRAF3-204ENST00000539721 BECN1Q14457 450 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 AGBL3Q8NEM8 1001 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 SERPINA10Q9UK55 444 aa19.21■□□□□ 0.67
TRAF3-204ENST00000539721 ZBTB12Q9Y330 459 aaPredicted RBP19.21■□□□□ 0.67
TRAF3-204ENST00000539721 E7EWF7 191 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 FZD9O00144 591 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 RHBDL3P58872 404 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 ZDHHC15Q96MV8 337 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 GMLQ99445 158 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 DCP1AQ9NPI6 582 aaPredicted RBP19.2■□□□□ 0.66
TRAF3-204ENST00000539721 HDAC9Q9UKV0 1011 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 TIAM2Q8IVF5 1701 aa19.2■□□□□ 0.66
TRAF3-204ENST00000539721 STOX1Q6ZVD7 989 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 TGFBRAP1Q8WUH2 860 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 SNX21Q969T3 373 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 NEK1Q96PY6 1258 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 ZSWIM6Q9HCJ5 1215 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 CYP46A1Q9Y6A2 500 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 BLOC1S2Q6QNY1 142 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 USP40Q9NVE5 1235 aa19.19■□□□□ 0.66
TRAF3-204ENST00000539721 MINDY4BA8MYZ0 360 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 CPA1P15085 419 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 CFAP100Q494V2 611 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 APOBEC3HQ6NTF7 200 aaKnown RBP19.18■□□□□ 0.66
TRAF3-204ENST00000539721 RUFY3Q7L099 469 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 MAPKAPK5Q8IW41 473 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
TRAF3-204ENST00000539721 MYH1P12882 1939 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 CD2BP2O95400 341 aaKnown RBP19.17■□□□□ 0.66
TRAF3-204ENST00000539721 USP17L8P0C7I0 530 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 PPARAQ07869 468 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 GPR162Q16538 588 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 CTR9Q6PD62 1173 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 NBPF3Q9H094 633 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 MCM9Q9NXL9 1143 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
TRAF3-204ENST00000539721 DAXXQ9UER7 740 aaPredicted RBP19.17■□□□□ 0.66
TRAF3-204ENST00000539721 PCDHAC2Q9Y5I4 1007 aa19.17■□□□□ 0.66
TRAF3-204ENST00000539721 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms