RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 H0YIN7 160 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 CYP7A1P22680 504 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 DNM1Q05193 864 aaKnown RBP23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 LRSAM1Q6UWE0 723 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 CDC37L1Q7L3B6 337 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 ZNF804AQ7Z570 1209 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 FBXL16Q8N461 479 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 CHMP4CQ96CF2 233 aa23.85■■□□□ 1.41
PACSIN3-211ENST00000539589 FIBPO43427 364 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 NASPP49321 788 aaPredicted RBP23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 SCRN1Q12765 414 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 LCORLQ8N3X6 602 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 MIGA1Q8NAN2 632 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 CD209Q9NNX6 404 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 MAST2Q6P0Q8 1798 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 SYCE3A1L190 88 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 C6orf229H3BNL8 230 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 PRDX5P30044 214 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 APOBRQ0VD83 1088 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 STYK1Q6J9G0 422 aa23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 NSUN4Q96CB9 384 aaKnown RBP23.84■■□□□ 1.41
PACSIN3-211ENST00000539589 ZNF213O14771 459 aa23.83■■□□□ 1.41
PACSIN3-211ENST00000539589 JAK2O60674 1132 aa23.83■■□□□ 1.41
PACSIN3-211ENST00000539589 HAND2P61296 217 aa23.83■■□□□ 1.41
PACSIN3-211ENST00000539589 ZNF274Q96GC6 653 aaPredicted RBP23.83■■□□□ 1.41
PACSIN3-211ENST00000539589 SLC16A10Q8TF71 515 aa23.83■■□□□ 1.4
PACSIN3-211ENST00000539589 EPB41L4AQ9HCS5 686 aaPredicted RBP23.83■■□□□ 1.4
PACSIN3-211ENST00000539589 C10orf71Q711Q0 1435 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 PRKAB2O43741 272 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 IL1R1P14778 569 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 MECOMQ03112 1051 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 MPNDQ8N594 471 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 SMARCC2Q8TAQ2 1214 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 DLEC1Q9Y238 1755 aa23.82■■□□□ 1.4
PACSIN3-211ENST00000539589 KRT85P78386 507 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 GRIK5Q16478 980 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 FAM184AQ8NB25 1140 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 NCOA7Q8NI08 942 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 ANP32BQ92688 251 aaKnown RBP23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 KIF3AQ9Y496 699 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 SALL1Q9NSC2 1324 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 KIAA1551Q9HCM1 1747 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 MCM5P33992 734 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 NAA16Q6N069 864 aaPredicted RBP23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 CHST3Q7LGC8 479 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 FERMT3Q86UX7 667 aa23.81■■□□□ 1.4
PACSIN3-211ENST00000539589 GSG1L2A8MUP6 293 aa23.8■■□□□ 1.4
PACSIN3-211ENST00000539589 PATL2C9JE40 543 aaKnown RBP23.8■■□□□ 1.4
PACSIN3-211ENST00000539589 RALYLQ86SE5 291 aaKnown RBP23.8■■□□□ 1.4
PACSIN3-211ENST00000539589 RIOK1Q9BRS2 568 aaKnown RBP23.8■■□□□ 1.4
PACSIN3-211ENST00000539589 NBPF3Q9H094 633 aa23.8■■□□□ 1.4
PACSIN3-211ENST00000539589 RIMBP2O15034 1052 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 PDIA3P30101 505 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 EVCP57679 992 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 DYNLL1P63167 89 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 KIF13BQ9NQT8 1826 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 H3BQV1 296 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 APPP05067 770 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 ALX1Q15699 326 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 IFFO2Q5TF58 517 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 MB21D2Q8IYB1 491 aaPredicted RBP23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 IFNL3Q8IZI9 196 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 NSUN7Q8NE18 718 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 WDR66Q8TBY9 1149 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 DDX11Q96FC9 970 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 NAP1L2Q9ULW6 460 aaPredicted RBP23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 TCHHQ07283 1943 aa23.79■■□□□ 1.4
PACSIN3-211ENST00000539589 DPP8Q6V1X1 898 aaPredicted RBP23.78■■□□□ 1.4
PACSIN3-211ENST00000539589 RBSNQ9H1K0 784 aa23.78■■□□□ 1.4
PACSIN3-211ENST00000539589 WDR19Q8NEZ3 1342 aa23.78■■□□□ 1.4
PACSIN3-211ENST00000539589 BAZ2AQ9UIF9 1905 aaKnown RBP23.78■■□□□ 1.4
PACSIN3-211ENST00000539589 MAGEB6P1A0A0J9YX57 407 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 PRC1O43663 620 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 TRDNQ13061 729 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 CCDC183Q5T5S1 534 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 C7orf43Q8WVR3 580 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 SLC4A4Q9Y6R1 1079 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 MYH2Q9UKX2 1941 aa23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 CCT2P78371 535 aaKnown RBP23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 ZNF219Q9P2Y4 722 aaPredicted RBP23.77■■□□□ 1.4
PACSIN3-211ENST00000539589 PTPDC1A2A3K4 754 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 LETM1O95202 739 aaPredicted RBP23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 ZBTB7AO95365 584 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 ZMYM6O95789 1325 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 CNKSR1Q969H4 720 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 SCAND2PQ9GZW5 306 aaPredicted RBP23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 ELP1O95163 1332 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 CTDNEP1O95476 244 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 FAM43AQ8N2R8 423 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 NKX2-3Q8TAU0 364 aa23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 ZSCAN16Q9H4T2 348 aaPredicted RBP23.76■■□□□ 1.39
PACSIN3-211ENST00000539589 GNAT2P19087 354 aa23.75■■□□□ 1.39
PACSIN3-211ENST00000539589 CCDC173Q0VFZ6 552 aa23.75■■□□□ 1.39
PACSIN3-211ENST00000539589 SPTY2D1Q68D10 685 aaPredicted RBP23.75■■□□□ 1.39
PACSIN3-211ENST00000539589 TBC1D10CQ8IV04 446 aa23.75■■□□□ 1.39
PACSIN3-211ENST00000539589 SDR42E1Q8WUS8 393 aa23.75■■□□□ 1.39
PACSIN3-211ENST00000539589 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.393e-18■■■■■ 86.9
PACSIN3-211ENST00000539589 TSPY26PQ9H489 355 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms