RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 SH3RF3Q8TEJ3 882 aaPredicted RBP10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 VEZTQ9HBM0 779 aa10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 SLC4A4Q9Y6R1 1079 aa10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 SBF1O95248 1867 aa10.33□□□□□ -0.76
LPCAT3-208ENST00000538987 SCN9AQ15858 1988 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 RFX7Q2KHR2 1363 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 CLRN2A0PK11 232 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 GPAA1O43292 621 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 PPP4CP60510 307 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 PICALMQ13492 652 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 APOBEC3HQ6NTF7 200 aaKnown RBP10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 CDC42EP5Q6NZY7 148 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 CCDC129Q6ZRS4 1044 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 PNMA8AQ86V59 439 aaPredicted RBP10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 CERS3Q8IU89 383 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 TEX11Q8IYF3 940 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 LCORLQ8N3X6 602 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 MTMR14Q8NCE2 650 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 AKAP11Q9UKA4 1901 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 GAKO14976 1311 aa10.32□□□□□ -0.76
LPCAT3-208ENST00000538987 MYH13Q9UKX3 1938 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 TIAM2Q8IVF5 1701 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 TCP10L2B9ZVM9 353 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 WNT10BO00744 389 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 EIF5BO60841 1220 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 EGFRP00533 1210 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 GNAT2P19087 354 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 YY1P25490 414 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 CACNB3P54284 484 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 TRPM4Q8TD43 1214 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 TGFBRAP1Q8WUH2 860 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 DCPSQ96C86 337 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 RIOK1Q9BRS2 568 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 NACAP1Q9BZK3 213 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 GPBP1L1Q9HC44 474 aaPredicted RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 ANO2Q9NQ90 1003 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 ZNF70Q9UC06 446 aaPredicted RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 DICER1Q9UPY3 1922 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 CCDC171Q6TFL3 1326 aa10.31□□□□□ -0.76
LPCAT3-208ENST00000538987 UTRNP46939 3433 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 SGSM2O43147 1006 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 PRKAB2O43741 272 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 TDO2P48775 406 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 TNNI2P48788 182 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 TCP10Q12799 353 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 ZNF589Q86UQ0 364 aaPredicted RBP10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 MAPKAPK5Q8IW41 473 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 AMOTL1Q8IY63 956 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 SDR42E1Q8WUS8 393 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 NMRK2Q9NPI5 230 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 RAD50Q92878 1312 aa10.3□□□□□ -0.76
LPCAT3-208ENST00000538987 POTECB2RU33 542 aa10.29□□□□□ -0.76
LPCAT3-208ENST00000538987 REC8O95072 547 aa10.29□□□□□ -0.76
LPCAT3-208ENST00000538987 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
LPCAT3-208ENST00000538987 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
LPCAT3-208ENST00000538987 RHBDL3P58872 404 aa10.29□□□□□ -0.76
LPCAT3-208ENST00000538987 ASTN2O75129 1339 aaPredicted RBP10.29□□□□□ -0.76
LPCAT3-208ENST00000538987 HSPD1P10809 573 aaKnown RBP10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 TNFAIP1Q13829 316 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 SLC4A8Q2Y0W8 1093 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 VPS53Q5VIR6 699 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 APOBEC3FQ8IUX4 373 aaKnown RBP10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 IFNL3Q8IZI9 196 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 NAPBQ9H115 298 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 IL25Q9H293 177 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 ATP8A2Q9NTI2 1148 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 MCM9Q9NXL9 1143 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 GGA3Q9NZ52 723 aa10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 SCAF8Q9UPN6 1271 aaKnown RBP10.28□□□□□ -0.76
LPCAT3-208ENST00000538987 GSG1L2A8MUP6 293 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 MINDY4BA8MYZ0 360 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 ENTPD3O75355 529 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 WDHD1O75717 1129 aaPredicted RBP10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 NFIAQ12857 509 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 RASA3Q14644 834 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 C8orf34Q49A92 452 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 IDI2Q9BXS1 227 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 CTNNA3Q9UI47 895 aa10.27□□□□□ -0.77
LPCAT3-208ENST00000538987 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
LPCAT3-208ENST00000538987 USP17L21D6R901 530 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms