RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 RGMBQ6NW40 437 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 ERICH6Q7L0X2 663 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 AACSQ86V21 672 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 CLASRPQ8N2M8 674 aaKnown RBP16.81■□□□□ 0.28
CD9-208ENST00000538834 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
CD9-208ENST00000538834 MROH7-TTC4A0A0A0MT08 1334 aa16.8■□□□□ 0.28
CD9-208ENST00000538834 USP2O75604 605 aaPredicted RBP16.8■□□□□ 0.28
CD9-208ENST00000538834 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
CD9-208ENST00000538834 CDAN1Q8IWY9 1227 aa16.8■□□□□ 0.28
CD9-208ENST00000538834 WBP1LQ9NX94 342 aa16.8■□□□□ 0.28
CD9-208ENST00000538834 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
CD9-208ENST00000538834 ABCF2Q9UG63 623 aa16.8■□□□□ 0.28
CD9-208ENST00000538834 MAP4K4O95819 1239 aaPredicted RBP16.79■□□□□ 0.28
CD9-208ENST00000538834 SLC10A3P09131 477 aa16.79■□□□□ 0.28
CD9-208ENST00000538834 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
CD9-208ENST00000538834 SUPT20HL1Q3ZLR7 823 aa16.79■□□□□ 0.28
CD9-208ENST00000538834 LRRCC1Q9C099 1032 aa16.79■□□□□ 0.28
CD9-208ENST00000538834 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
CD9-208ENST00000538834 PIH1D3Q9NQM4 214 aaKnown RBP16.79■□□□□ 0.28
CD9-208ENST00000538834 SNRKQ9NRH2 765 aa16.79■□□□□ 0.28
CD9-208ENST00000538834 PHIPQ8WWQ0 1821 aa16.79■□□□□ 0.28
CD9-208ENST00000538834 ATRNL1Q5VV63 1379 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
CD9-208ENST00000538834 CACNB3P54284 484 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 PPP4CP60510 307 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 MAP3K10Q02779 954 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
CD9-208ENST00000538834 SLF2Q8IX21 1173 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 TMEM39BQ9GZU3 492 aa16.78■□□□□ 0.28
CD9-208ENST00000538834 PTPRFP10586 1907 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 ATP5JP18859 108 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 NF2P35240 595 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 TNNI2P48788 182 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 NFIAQ12857 509 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
CD9-208ENST00000538834 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
CD9-208ENST00000538834 COL2A1P02458 1487 aaPredicted RBP16.77■□□□□ 0.28
CD9-208ENST00000538834 DDX60LQ5H9U9 1706 aaKnown RBP16.76■□□□□ 0.27
CD9-208ENST00000538834 SALL3Q9BXA9 1300 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 ATAD5Q96QE3 1844 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 AOC2O75106 756 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 ENTPD3O75355 529 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 LDHCP07864 332 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 NOGQ13253 232 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 ADGRA1Q86SQ6 560 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
CD9-208ENST00000538834 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 FZD1Q9UP38 647 aa16.76■□□□□ 0.27
CD9-208ENST00000538834 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
CD9-208ENST00000538834 BTDP43251 543 aa16.75■□□□□ 0.27
CD9-208ENST00000538834 GSTO1P78417 241 aa16.75■□□□□ 0.27
CD9-208ENST00000538834 SH3BP5LQ7L8J4 393 aa16.75■□□□□ 0.27
CD9-208ENST00000538834 ARMC9Q7Z3E5 817 aa16.75■□□□□ 0.27
CD9-208ENST00000538834 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
CD9-208ENST00000538834 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
CD9-208ENST00000538834 APBB1O00213 710 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 PPP1R12BO60237 982 aaPredicted RBP16.74■□□□□ 0.27
CD9-208ENST00000538834 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
CD9-208ENST00000538834 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
CD9-208ENST00000538834 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
CD9-208ENST00000538834 ZNF157P51786 506 aaPredicted RBP16.74■□□□□ 0.27
CD9-208ENST00000538834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.27
CD9-208ENST00000538834 EXOC6Q8TAG9 804 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 TMOD2Q9NZR1 351 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 RAI14Q9P0K7 980 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 ZNF112Q9UJU3 913 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
CD9-208ENST00000538834 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 CASP8AP2Q9UKL3 1982 aa16.74■□□□□ 0.27
CD9-208ENST00000538834 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
CD9-208ENST00000538834 MAP2K1Q02750 393 aaPredicted RBP16.73■□□□□ 0.27
CD9-208ENST00000538834 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
CD9-208ENST00000538834 HAUS7Q99871 368 aa16.73■□□□□ 0.27
CD9-208ENST00000538834 BAZ2AQ9UIF9 1905 aaKnown RBP16.72■□□□□ 0.27
CD9-208ENST00000538834 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
CD9-208ENST00000538834 RGS3P49796 1198 aa16.72■□□□□ 0.27
CD9-208ENST00000538834 NAA16Q6N069 864 aaPredicted RBP16.72■□□□□ 0.27
CD9-208ENST00000538834 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
CD9-208ENST00000538834 CSRNP1Q96S65 589 aa16.72■□□□□ 0.27
CD9-208ENST00000538834 FOXN1O15353 648 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 TM4SF4P48230 202 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 KIF23Q02241 960 aaPredicted RBP16.71■□□□□ 0.27
CD9-208ENST00000538834 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.27
CD9-208ENST00000538834 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
CD9-208ENST00000538834 ANKRD13AQ8IZ07 590 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 CLMNQ96JQ2 1002 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
CD9-208ENST00000538834 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
CD9-208ENST00000538834 GJA5P36382 358 aa16.7■□□□□ 0.26
CD9-208ENST00000538834 IREB2P48200 963 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms