RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LIFRP42702 1097 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 AKNAD1Q5T1N1 836 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
LIMK1-208ENST00000538333 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 GJB4Q9NTQ9 266 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 CDC27P30260 824 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 GYG1P46976 350 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 NTRK3Q16288 839 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 BRAPQ7Z569 592 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 CNNM2Q9H8M5 875 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 LRP2BPQ9P2M1 347 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
LIMK1-208ENST00000538333 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 PTMAP06454 111 aaKnown RBP16.35■□□□□ 0.21
LIMK1-208ENST00000538333 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 ADGRA1Q86SQ6 560 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 STAG1Q8WVM7 1258 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
LIMK1-208ENST00000538333 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
LIMK1-208ENST00000538333 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 NID2Q14112 1375 aa16.35■□□□□ 0.21
LIMK1-208ENST00000538333 KIF28PB7ZC32 967 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 OFD1O75665 1012 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 RXRAP19793 462 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
LIMK1-208ENST00000538333 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 FBXO41Q8TF61 875 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 CELF1Q92879 486 aaKnown RBP16.34■□□□□ 0.21
LIMK1-208ENST00000538333 NACAP1Q9BZK3 213 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 PCDHA7Q9UN72 937 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
LIMK1-208ENST00000538333 ZBTB43O43298 467 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 CDKL5O76039 1030 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 KRT23Q9C075 422 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 CBX8Q9HC52 389 aa16.34■□□□□ 0.21
LIMK1-208ENST00000538333 LY75O60449 1722 aa16.33■□□□□ 0.21
LIMK1-208ENST00000538333 YEATS4O95619 227 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 POLR3DP05423 398 aaPredicted RBP16.33■□□□□ 0.2
LIMK1-208ENST00000538333 ME1P48163 572 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 TDO2P48775 406 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 GNL3LQ9NVN8 582 aaKnown RBP16.33■□□□□ 0.2
LIMK1-208ENST00000538333 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.2
LIMK1-208ENST00000538333 CLIC4Q9Y696 253 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 CTAGE5O15320 804 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 CYP7A1P22680 504 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 ADALQ6DHV7 355 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 SASS6Q6UVJ0 657 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 CCDC73Q6ZRK6 1079 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 FAM84BQ96KN1 310 aaPredicted RBP16.33■□□□□ 0.2
LIMK1-208ENST00000538333 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
LIMK1-208ENST00000538333 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
LIMK1-208ENST00000538333 A0A1W2PQ27 194 aa16.32■□□□□ 0.2
LIMK1-208ENST00000538333 A0A1W2PQ64 194 aa16.32■□□□□ 0.2
LIMK1-208ENST00000538333 A0A1W2PQD8 194 aa16.32■□□□□ 0.2
LIMK1-208ENST00000538333 IFIT3O14879 490 aaKnown RBP16.32■□□□□ 0.2
LIMK1-208ENST00000538333 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
LIMK1-208ENST00000538333 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
LIMK1-208ENST00000538333 GOLGA8AA7E2F4 631 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 CPLX2Q6PUV4 134 aaKnown RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 FSIP1Q8NA03 581 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 PHKBQ93100 1093 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 MYL10Q9BUA6 226 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 GTF2E1P29083 439 aaPredicted RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 CAVIN4Q5BKX8 364 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 FMR1NBQ8N0W7 255 aaPredicted RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 SETDB2Q96T68 719 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 STK36Q9NRP7 1315 aa16.31■□□□□ 0.2
LIMK1-208ENST00000538333 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
LIMK1-208ENST00000538333 GNPATO15228 680 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 CAVIN2O95810 425 aa16.3■□□□□ 0.2
LIMK1-208ENST00000538333 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms